HHsearch alignment for GI: 254780279 and conserved domain: cd01338

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.89  E-value=0.012  Score=38.25  Aligned_cols=124  Identities=16%  Similarity=0.250  Sum_probs=61.6

Q ss_pred             CCEEEEEECC-CHHHHHHHHHHHHC------CCCEEEEEEECCCCH--HH--CCCHHHHCCCCCCCCCCCCCHHHHHCCC
Q ss_conf             8737999899-87799999999838------997899999648980--20--4553666087546754556857852135
Q gi|254780279|r    4 SPMRISVLGG-GRMGQALIKEIHNN------PSITLHSIIVRSGSP--LI--GQDVGNFVGISPMGIKFSDNLAMAIQSV   72 (280)
Q Consensus         4 ~~IkV~I~Ga-GkMG~~ii~~i~~~------~~~eLv~~i~~~~~~--~~--g~d~~~~~~~~~~~v~i~~dl~~~~~~~   72 (280)
T Consensus         1 ~p~KV~IiGAaG~IG~~la~~la~g~l~g~~~~v~l-~L~Di~~~~~~l~G~amDl~~~a~~~~~~v~~~~~~~~a~~~a   79 (322)
T cd01338           1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVIL-QLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDA   79 (322)
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHHCHHCCCCCEEEE-EEECCCCCCCCCCEEEEEHHHCCCCCCCCEEEECCHHHHHCCC
T ss_conf             970999989996899999999971113079972699-9975757566676577445326765458779748878983788


Q ss_pred             CEEEEEE-CC-CHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH-CCCCCEECCCHHHHHHHHHHHH
Q ss_conf             5047631-01-024788876432372157650222313589998740-3555210000115689999999
Q gi|254780279|r   73 DGIIDFS-SP-ALTLQSLNISAQHNIVHIIGTTGFSVKENEVISSFA-RNAPIVKSSNMSLGINFLGFLV  139 (280)
Q Consensus        73 DViIDFT-~P-~~~~~~~~~a~~~g~~vViGTTG~~~e~~~~l~~~s-~~~~il~apN~SiGv~ll~~l~  139 (280)
T Consensus        80 DvVvitaG~prkPG~tR~DLl~~-Na~I-------~~~~~~~i~~~a~p~~~vivvsNP---vd~~~~v~  138 (322)
T cd01338          80 DWALLVGAKPRGPGMERADLLKA-NGKI-------FTAQGKALNDVASRDVKVLVVGNP---CNTNALIA  138 (322)
T ss_pred             CEEEEECCCCCCCCCCHHHHHHH-HHHH-------HHHHHHHHHHHCCCCCEEEEECCH---HHHHHHHH
T ss_conf             78999368789989818999998-6899-------999999999757988389995781---88899999