HHsearch alignment for GI: 254780279 and conserved domain: pfam00056
>pfam00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain. L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold.
Probab=96.81 E-value=0.0057 Score=40.47 Aligned_cols=128 Identities=14% Similarity=0.149 Sum_probs=70.9
Q ss_pred EEEEEECCC-HHHHHHHHHHHHCCCCEEEEEEECCCCHHHCC--CHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEE-CC
Q ss_conf 379998998-77999999998389978999996489802045--536660875467545568578521355047631-01
Q gi|254780279|r 6 MRISVLGGG-RMGQALIKEIHNNPSITLHSIIVRSGSPLIGQ--DVGNFVGISPMGIKFSDNLAMAIQSVDGIIDFS-SP 81 (280)
Q Consensus 6 IkV~I~GaG-kMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~--d~~~~~~~~~~~v~i~~dl~~~~~~~DViIDFT-~P 81 (280)
T Consensus 1 mKV~IIGagg~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~~~~~~~daDiVVitaG~~ 80 (142)
T pfam00056 1 VKVAVVGAGGGVGSSLAFALALQGLADELVLVDINKDKAEGVAMDLSHGSTFLSVPGIVGGDDYEALKDADVVVITAGVP 80 (142)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEECCCCHHHHCCCCEEEEECCCC
T ss_conf 98999898778999999999747966347885057764117999986144347887697488388837899999815777
Q ss_pred C-HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 0-24788876432372157650222313589998740355521000011568999999999998
Q gi|254780279|r 82 A-LTLQSLNISAQHNIVHIIGTTGFSVKENEVISSFARNAPIVKSSNMSLGINFLGFLVETAAE 144 (280)
Q Consensus 82 ~-~~~~~~~~a~~~g~~vViGTTG~~~e~~~~l~~~s~~~~il~apN~SiGv~ll~~l~~~~a~ 144 (280)
T Consensus 81 ~k~g~~R~dl-l~~Na~I~-------~~i~~~i~~~~p~~ivivvtNP---vDvmt~~~~~~sg 133 (142)
T pfam00056 81 RKPGMTRLDL-LNRNAGIF-------KDIVPAIAKSAPDAIVLVVSNP---VDILTYIAWKVSG 133 (142)
T ss_pred CCCCCCHHHH-HHHHHHHH-------HHHHHHHHHHCCCEEEEEECCC---HHHHHHHHHHHHC
T ss_conf 8999877899-99746999-------9999999976998199994594---6889999999978