HHsearch alignment for GI: 254780279 and conserved domain: pfam00899
>pfam00899 ThiF ThiF family. This family contains a repeated domain in ubiquitin activating enzyme E1 and members of the bacterial ThiF/MoeB/HesA family.
Probab=97.51 E-value=0.00046 Score=47.97 Aligned_cols=99 Identities=17% Similarity=0.269 Sum_probs=61.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCC--HHH-------CCCHH----HH-----CCCC-C-----CCCCC-
Q ss_conf 79998998779999999983899789999964898--020-------45536----66-----0875-4-----67545-
Q gi|254780279|r 7 RISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGS--PLI-------GQDVG----NF-----VGIS-P-----MGIKF- 61 (280)
Q Consensus 7 kV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~--~~~-------g~d~~----~~-----~~~~-~-----~~v~i- 61 (280)
T Consensus 3 kVlivG~GglG~~~~~~La~~-Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i~ 81 (134)
T pfam00899 3 RVLVVGAGGLGSPAAEYLARA-GVGKLTLVDFDTVELSNLNRQILFTESDIGKPKAEVAKERLRAINPDVEVEAYPERLT 81 (134)
T ss_pred EEEEECCCHHHHHHHHHHHHH-CCCEEEEEECCCCCCCCCCCEEECCHHHCCCEEHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 899989888999999999993-8974999989567632227224233646688107999999997789958999925679
Q ss_pred CCCHHHHHCCCCEEEEEE-CCCHHHHHHHHHHHCCCEEEEEEC-CCC
Q ss_conf 568578521355047631-010247888764323721576502-223
Q gi|254780279|r 62 SDNLAMAIQSVDGIIDFS-SPALTLQSLNISAQHNIVHIIGTT-GFS 106 (280)
Q Consensus 62 ~~dl~~~~~~~DViIDFT-~P~~~~~~~~~a~~~g~~vViGTT-G~~ 106 (280)
T Consensus 82 ~~~~~~~~~~~DvVi~~~Dn~~~r~~ln~~c~~~~ip~i~~~~~g~~ 128 (134)
T pfam00899 82 PENLEELLKGADLVVDALDNFAARYLLNDACVKRGIPLISAGALGFD 128 (134)
T ss_pred HHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCE
T ss_conf 77876426448899999899999999999999859989995546788