HHsearch alignment for GI: 254780279 and conserved domain: pfam01488

>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=97.13  E-value=0.0016  Score=44.27  Aligned_cols=78  Identities=15%  Similarity=0.221  Sum_probs=49.9

Q ss_pred             CEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEE-CCCH
Q ss_conf             737999899877999999998389978999996489802045536660875467545568578521355047631-0102
Q gi|254780279|r    5 PMRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPMGIKFSDNLAMAIQSVDGIIDFS-SPAL   83 (280)
Q Consensus         5 ~IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~v~i~~dl~~~~~~~DViIDFT-~P~~   83 (280)
T Consensus        12 ~~~vlVIGaG~~~~~~~~~L~~~-g~~~i~v~nRt~~k--a~~la~~~~~~~~~~~~~~~l~~~l~~~DivI~aT~s~~~   88 (134)
T pfam01488        12 GKKVLLIGAGEMARLAAKHLLSK-GAKKITIANRTLEK--AKELAEEFGGEEVEALPLDELEELLAEADIVISATSAPTP   88 (134)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHC-CCCEEEEECCCHHH--HHHHHHHCCCCCEEEEECHHHHHHHHHCCEEEEECCCCCC
T ss_conf             89899999609999999999975-99889995475789--9999998499725898513544136319999992599973


Q ss_pred             HH
Q ss_conf             47
Q gi|254780279|r   84 TL   85 (280)
Q Consensus        84 ~~   85 (280)
T Consensus        89 ii   90 (134)
T pfam01488        89 II   90 (134)
T ss_pred             EE
T ss_conf             64