HHsearch alignment for GI: 254780279 and conserved domain: pfam02254
>pfam02254 TrkA_N TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.
Probab=93.72 E-value=0.38 Score=27.98 Aligned_cols=102 Identities=17% Similarity=0.327 Sum_probs=46.1
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCC-CCCCC-CCCHHHH-HCCCCEEEEEE-CCCH
Q ss_conf 9998998779999999983899789999964898020455366608754-67545-5685785-21355047631-0102
Q gi|254780279|r 8 ISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISP-MGIKF-SDNLAMA-IQSVDGIIDFS-SPAL 83 (280)
Q Consensus 8 V~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~-~~v~i-~~dl~~~-~~~~DViIDFT-~P~~ 83 (280)
T Consensus 1 viI~G~g~~G~~la~~L~~~~--~v-~vId~d~~~~~--~~~~-~~~~vi~GD~~~~~~L~~a~i~~a~~vi~~~~~d~~ 74 (115)
T pfam02254 1 IIIIGYGRVGRSLAEELREGG--PV-VVIDKDPERVE--ELRE-EGVPVVVGDATDEEVLEEAGIEDADAVVAATGDDEA 74 (115)
T ss_pred CEEECCCHHHHHHHHHHHHCC--CE-EEEECCHHHHH--HHHH-CCCEEEEEECCCHHHHHHHCCCCCCEEEEECCCHHH
T ss_conf 999878889999999998089--99-99999879987--7886-698699995688667876192028799996298499
Q ss_pred HHHHHHHHHH-CCCEEEEEECCCCHHHHHHHHHH
Q ss_conf 4788876432-37215765022231358999874
Q gi|254780279|r 84 TLQSLNISAQ-HNIVHIIGTTGFSVKENEVISSF 116 (280)
Q Consensus 84 ~~~~~~~a~~-~g~~vViGTTG~~~e~~~~l~~~ 116 (280)
T Consensus 75 n~~~~~~~r~~~~~~~ii-ar~~~~~~~~~l~~~ 107 (115)
T pfam02254 75 NILIVLLARELNPAKKII-ARANDPEHAELLRRL 107 (115)
T ss_pred HHHHHHHHHHHCCCCEEE-EEECCHHHHHHHHHC
T ss_conf 999999999978998099-998789999999976