HHsearch alignment for GI: 254780279 and conserved domain: smart00859
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=97.50 E-value=0.00081 Score=46.28 Aligned_cols=97 Identities=13% Similarity=0.181 Sum_probs=59.3
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCC-CCCCCCCCCHHHHHCCCCEEEEEECCCHH
Q ss_conf 7999899-877999999998389978999996489802045536660875-46754556857852135504763101024
Q gi|254780279|r 7 RISVLGG-GRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGIS-PMGIKFSDNLAMAIQSVDGIIDFSSPALT 84 (280)
Q Consensus 7 kV~I~Ga-GkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~-~~~v~i~~dl~~~~~~~DViIDFT~P~~~ 84 (280)
T Consensus 1 kVaIvGatGyvG~eli~lL~~hp~~~~~~l~as~~--~~G~~i~~~~~~l~~~~~~~~~~~~~~~~~~Dvvf~a~p~~~s 78 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASAR--SAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVS 78 (122)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECC--CCCCCHHHHCCCCCCCCCCEECCCCCCCCCCCEEEECCCCHHH
T ss_conf 98998945199999999998589974577774046--5897578859664577350565331100179999993882788
Q ss_pred HHHHHH---HHHCCCEEEEEECCC
Q ss_conf 788876---432372157650222
Q gi|254780279|r 85 LQSLNI---SAQHNIVHIIGTTGF 105 (280)
Q Consensus 85 ~~~~~~---a~~~g~~vViGTTG~ 105 (280)
T Consensus 79 ~~~~~~~~~~~~~g~~VIDlSadf 102 (122)
T smart00859 79 KEIAPLLPKAAEAGVKVIDLSSAF 102 (122)
T ss_pred HHHHHHHHHHHHCCCEEEECCHHH
T ss_conf 999998898875698798684775