HHsearch alignment for GI: 254780280 and conserved domain: PRK01433
>PRK01433 hscA chaperone protein HscA; Provisional.
Probab=95.66 E-value=0.14 Score=27.88 Aligned_cols=190 Identities=16% Similarity=0.116 Sum_probs=79.2
Q ss_pred HHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCEECCCCCCCCCCC
Q ss_conf 98289855882126543200001586553530243455766675279931762022454310588630113567866667
Q gi|254780280|r 100 SRMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIG 179 (348)
Q Consensus 100 ~~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g~~~~~~~~~g~~~~agE~Gh~~~~ 179 (348)
T Consensus 165 ~iAGL~VlRlInEPTAAAlAYGl~---------------k~~~~~ilVyDLGGGTfDVSil~~~~g~feVlat~GD~~LG 229 (595)
T PRK01433 165 KIAGFEVLRLIAEPTAAAYAYGLN---------------KNQKGCYLVYDLGGGTFDVSILNIQEGIFQVIATNGDNMLG 229 (595)
T ss_pred HHCCCCEEEECCHHHHHHHHHCCC---------------CCCCCEEEEEECCCCEEEEEEEEEECCEEEEEEECCCCCCC
T ss_conf 984991587336889999981876---------------68886599998889718999999518808999703788767
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHH-HHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 6610234789999853189864877522223899999-998740888643698889988368957999999999999999
Q gi|254780280|r 180 PSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIYK-ALCIADGFESNKVLSSKDIVSKSEDPIALKAINLFCEYLGRV 258 (348)
Q Consensus 180 ~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y~-~l~~~~~~~~~~~~~~~~~~~~~~D~~A~~~~~~~~~~lg~~ 258 (348)
T Consensus 230 G~-DfD~~i~~~l~~~f~~~~~~~~~---~-~ae~aK~~Ls~~~~~~~----~~~~ltR~~Fe~l~~~L~~r~~~~v~~~ 300 (595)
T PRK01433 230 GN-DIDVVITQYLCNKFDLPNSIDTL---Q-LAKKAKETLTYKDSFNN----DNISINKQTLEQLILPLVERTINIAQEC 300 (595)
T ss_pred HH-HHHHHHHHHHHHHHCCCCCHHHH---H-HHHHHHHHHCCCCCCCC----CCEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55-68999999999872877778899---9-99999998233543457----7418769999999999999999999999
Q ss_pred HHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEEECCCCHHHHHHHHHH
Q ss_conf 9999997489973899656776556772764899998837983788973887999578722775999873
Q gi|254780280|r 259 AGDLALIFMARGGVYISGGIPYKIIDLLRNSSFRESFENKSPHKELMRQIPTYVITNPYIAIAGMVSYIK 328 (348)
Q Consensus 259 i~~l~~~~~p~~~IvlgGGi~~~~~~~l~~~~f~~~f~~~~~~~~~l~~ipv~~~~~~~agl~GAa~~~r 328 (348)
T Consensus 301 L~~a~-~~dI-d~ViLVGGsTRi--P~Vq~--~l~~~Fg~~~---------~~~inPDEaVA~GAAiqa~ 355 (595)
T PRK01433 301 LEQAG-NPNI-DGVILVGGATRI--PLIKD--ELYKAFKVDI---------LSDIDPDKAVVWGAALQAE 355 (595)
T ss_pred HHHCC-CCCC-CEEEEECCCCCC--HHHHH--HHHHHHCCCC---------CCCCCHHHHHHHHHHHHHH
T ss_conf 99769-3535-548996785545--89999--9999858997---------7897847899998999877