HHsearch alignment for GI: 254780280 and conserved domain: PRK13929
>PRK13929 rod-share determining protein MreBH; Provisional.
Probab=90.15 E-value=1.2 Score=22.21 Aligned_cols=97 Identities=12% Similarity=0.116 Sum_probs=48.9
Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEEE---E-----------------------------CC-----CCCCCHHHHH
Q ss_conf 737999857511899998779980889997---4-----------------------------38-----8735889999
Q gi|254780280|r 13 FPVLLADIGGTNVRFAILRSMESEPEFCCT---V-----------------------------QT-----SDYENLEHAI 55 (348)
Q Consensus 13 ~~vL~iDIGGT~ir~glv~~~~~~i~~~~~---~-----------------------------~t-----~~~~~~~~~i 55 (348)
T Consensus 4 ~~~iGIDLGTtns~v~~~~--~gii~~ePSvva~d~~~~~~~avG~~Ak~~~~~~p~~i~~~~p~~~g~i~d~e~s~~iL 81 (335)
T PRK13929 4 STEIGIDLGTANILVYSKN--KGIILNEPSVVAVDTETKAVLAIGTEAKNMIGKTPGKIVAVRPMKDGVIADYDMTTDLL 81 (335)
T ss_pred CCEEEEECCHHHEEEEECC--CCEECCCCCEEEEECCCCEEEEECHHHHHHHCCCCCCEEEEEECCCCEECCHHHHHHHH
T ss_conf 8816898753528999878--99888478689997799729996499999715697768999857896345667679999
Q ss_pred HHHHHHCC---CCCCC--EEEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHH
Q ss_conf 99997223---45655--4699973044168556421356666988999982898558821265432000
Q gi|254780280|r 56 QEVIYRKI---SIRLR--SAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAI 120 (348)
Q Consensus 56 ~~~l~~~~---~~~~~--~igi~v~Gpv~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~i~ND~~a~a~~~ 120 (348)
T Consensus 82 ~~l~~~a~~~~g~~~~~p~~VItVPa~ft~~q---------R~A~~~Aa~~AG~~~v~li~EPtAAAlg~ 142 (335)
T PRK13929 82 KQIMKKAGKNIGMTFRKPTVVVCTPSGSTAVE---------RRAISDAVKNCGAKQVHLIEEPVAAAIGA 142 (335)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEECCCCCHHH---------HHHHHHHHHHCCCEEEEEECCHHHHHHHC
T ss_conf 99999999851876688878999299999999---------99999999975980899844068999877