HHsearch alignment for GI: 254780280 and conserved domain: TIGR02529
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein; InterPro: IPR013366 Salmonella typhimurium is capable of growth on ethanolamine as a sole source of carbon nitrogen and energy . During growth on this compound the cells form a multimolecular structure known as a metabolosome, which is similar to the carboxysome used by some photosynthetic bacteria to fix CO2, and is thought to contain the enzymes needed to metabolise this compound to acetyl-CoA. The metabolosome is not directly involved in the biochemistry of ethanolamine utilization - instead its role is thought to be to concentrate the enzymes involved in this process, while also protecting the cell from the build-up of toxic intermediates . The genes involved in growth on ethanolamine are encoded in a 17-gene operon known as the ethanolamine utilization (eut) operon. EutJ shows similarity to chaperonins and may play a role in assembly of the metabolosme , though it is not necessary for growth on this compound..
Probab=91.54 E-value=0.86 Score=23.01 Aligned_cols=93 Identities=15% Similarity=0.238 Sum_probs=56.0
Q ss_pred EEEECCCCEEEEEEECCCCEEEEEEEECCC--------CCCCHHHHHH---HHHHHCCCCCCCEEEEEEE-EEEECCCEE
Q ss_conf 998575118999987799808899974388--------7358899999---9997223456554699973-044168556
Q gi|254780280|r 17 LADIGGTNVRFAILRSMESEPEFCCTVQTS--------DYENLEHAIQ---EVIYRKISIRLRSAFLAIA-TPIGDQKSF 84 (348)
Q Consensus 17 ~iDIGGT~ir~glv~~~~~~i~~~~~~~t~--------~~~~~~~~i~---~~l~~~~~~~~~~igi~v~-Gpv~~~~~~ 84 (348)
T Consensus 1 GVDLGTa~IV~vVLD~-d~~PVAg~~~~a~VVRDG~VVDf~~A~~iV~rLK~~lE~klG~~lt~A~~A~PPGt~~~~~k~ 79 (240)
T TIGR02529 1 GVDLGTANIVIVVLDE-DGQPVAGVMQFADVVRDGIVVDFLEAVEIVKRLKDKLEKKLGIELTHAATAVPPGTEEGDVKV 79 (240)
T ss_pred CCCEEEEEEEEEEEEC-CCCEEEEEECHHHEEECCEEEECHHHHHHHHHHHHHHHHHHCCEEEECCEECCCCCCCCCEEE
T ss_conf 9750452089999845-996389985323235534378204478899999988888809456413150089758897589
Q ss_pred EECCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHH
Q ss_conf 421356666988999982898558821265432000
Q gi|254780280|r 85 TLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAI 120 (348)
Q Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~v~i~ND~~a~a~~~ 120 (348)
T Consensus 80 ~vNV----------~EsAG~eV~~V~DEPTAAa~vL 105 (240)
T TIGR02529 80 IVNV----------VESAGIEVLKVLDEPTAAAAVL 105 (240)
T ss_pred EEEE----------EECCCEEEEEEECCHHHHHHHH
T ss_conf 9998----------7225615766514278999872