HHsearch results for GI: 254780280 and protein with PDBid: 2ch5_A

>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, ribonuclease H fold, sugar kinase/HSP70/actin superfamily, domain rotation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=99.96  E-value=1.1e-27  Score=187.69  Aligned_cols=297  Identities=11%  Similarity=-0.069  Sum_probs=162.0

Q ss_pred             CCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCC--CCHH-------HHHHHHHHHCC---CCCCCEEEEEEEEE
Q ss_conf             667737999857511899998779980889997438873--5889-------99999997223---45655469997304
Q gi|254780280|r   10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDY--ENLE-------HAIQEVIYRKI---SIRLRSAFLAIATP   77 (348)
Q Consensus        10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~--~~~~-------~~i~~~l~~~~---~~~~~~igi~v~Gp   77 (348)
                      +|+.=.|+||+||||+|++++|. +++++.+.+.++..+  .+.+       +.+++++++..   ...+.+++++.+|.
T Consensus         3 ~m~~~~iGIDiGGTk~~~~l~d~-~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~g~~~~~~i~~ig~~~~g~   81 (347)
T 2ch5_A            3 FMAAIYGGVEGGGTRSEVLLVSE-DGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGG   81 (347)
T ss_dssp             SSSCEEEEEEECTTCEEEEEEET-TSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTT
T ss_pred             CCCCEEEEEECCCHHEEEEEECC-CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
T ss_conf             64878999990612128889949-99999999946899665899999999999999999974999776444433423665


Q ss_pred             EECCCEEEECCCCCCCCHHHHHH--HHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEE
Q ss_conf             41685564213566669889999--8289855882126543200001586553530243455766675279931762022
Q gi|254780280|r   78 IGDQKSFTLTNYHWVIDPEELIS--RMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLG  155 (348)
Q Consensus        78 v~~~~~~~~~~~~~~~~~~~l~~--~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g  155 (348)
                      +.......        .......  .....+|.+.||.++.++++...                  .  .+.+..|||.+
T Consensus        82 ~~~~~~~~--------~~~~~~~~~~~~~~~v~i~nDa~a~~~~~~~~------------------~--~~~~~~gtg~~  133 (347)
T 2ch5_A           82 DQEDAGRI--------LIEELRDRFPYLSESYLITTDAAGSIATATPD------------------G--GVVLISGTGSN  133 (347)
T ss_dssp             TCHHHHHH--------HHHHHHHHCTTSBSCEEEEEHHHHHHHHHCSS------------------C--EEEEEESSSEE
T ss_pred             CCCCCCEE--------CCCHHHHHCCCCCCEEEEECHHHHHHHHHCCC------------------C--CEEEEECCCEE
T ss_conf             57531211--------14123343257787199956699988764059------------------9--48999702589


Q ss_pred             EEEEECCC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH------HHHHHHCCCCCC
Q ss_conf             45431058--8630113567866667661023478999985318986487752222389999------999874088864
Q gi|254780280|r  156 ISSVIRAK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIY------KALCIADGFESN  227 (348)
Q Consensus       156 ~~~~~~~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y------~~l~~~~~~~~~  227 (348)
                      ........  .+...+..+.||..................+.|....|.+...+...+...+      ..+.........
T Consensus       134 ~~~~~~~~~~~~~~g~g~~~G~~~~~~~ig~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (347)
T 2ch5_A          134 CRLINPDGSESGCGGWGHMMGDEGSAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDK  213 (347)
T ss_dssp             EEEECTTSCEEEEECCCTTTCCTTSHHHHHHHHHHHHHHHHHTSSCCSSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCH
T ss_pred             EEEEECCCCEEEECCCCEEECCCCCCCCHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH
T ss_conf             99997697169954753113345766400012202322147887665411689999999760899779999998616783


Q ss_pred             CC----CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-------EEEECHHHHHHHHHHCCHHHHHHHH
Q ss_conf             36----988899883689579999999999999999999997489973-------8996567765567727648999988
Q gi|254780280|r  228 KV----LSSKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGG-------VYISGGIPYKIIDLLRNSSFRESFE  296 (348)
Q Consensus       228 ~~----~~~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~-------IvlgGGi~~~~~~~l~~~~f~~~f~  296 (348)
                      ..    ......++++||+.|++++++++++||+.+++++++++|+..       ||||||++.+...++  +.|++.+.
T Consensus       214 ~~~a~~~~~v~~~A~~GD~~A~~ii~~~~~~Lg~~ia~~~~~ldP~~~~~~~~~~VVlgGgv~~~~~~l~--~~~~~~l~  291 (347)
T 2ch5_A          214 CRFAGFCRKIAEGAQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLK--EGFLLALT  291 (347)
T ss_dssp             HHHHTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHH--HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCHHHCCHHHH--HHHHHHHH
T ss_conf             4566650444788877899999999999999999999999851936434788854999860574887899--99999998


Q ss_pred             HCCCHHHHHHHC-CEEEEECCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf             379837889738-879995787227759998738001244457
Q gi|254780280|r  297 NKSPHKELMRQI-PTYVITNPYIAIAGMVSYIKMTDCFNLFIS  338 (348)
Q Consensus       297 ~~~~~~~~l~~i-pv~~~~~~~agl~GAa~~~r~~~~~~~~~~  338 (348)
                      ++... ...... .++++..++++++||+.+++++....++.+
T Consensus       292 ~~~~~-~~~~~~~~v~~~~~~~~~~~GAa~LA~~~~~~~l~~~  333 (347)
T 2ch5_A          292 QGREI-QAQNFFSSFTLMKLRHSSALGGASLGARHIGHLLPMD  333 (347)
T ss_dssp             HHC----CCCSCSEEEEEEESSCTHHHHHHHHHHTTTCCCCCC
T ss_pred             HHCCC-CCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf             63221-1025677069964898759999999998659977887