HHsearch results for GI: 254780280 and protein with PDBid: 2ch5_A
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, ribonuclease H fold, sugar kinase/HSP70/actin superfamily, domain rotation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=99.96 E-value=1.1e-27 Score=187.69 Aligned_cols=297 Identities=11% Similarity=-0.069 Sum_probs=162.0
Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCC--CCHH-------HHHHHHHHHCC---CCCCCEEEEEEEEE
Q ss_conf 667737999857511899998779980889997438873--5889-------99999997223---45655469997304
Q gi|254780280|r 10 PIAFPVLLADIGGTNVRFAILRSMESEPEFCCTVQTSDY--ENLE-------HAIQEVIYRKI---SIRLRSAFLAIATP 77 (348)
Q Consensus 10 ~~~~~vL~iDIGGT~ir~glv~~~~~~i~~~~~~~t~~~--~~~~-------~~i~~~l~~~~---~~~~~~igi~v~Gp 77 (348)
+|+.=.|+||+||||+|++++|. +++++.+.+.++..+ .+.+ +.+++++++.. ...+.+++++.+|.
T Consensus 3 ~m~~~~iGIDiGGTk~~~~l~d~-~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~g~~~~~~i~~ig~~~~g~ 81 (347)
T 2ch5_A 3 FMAAIYGGVEGGGTRSEVLLVSE-DGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGG 81 (347)
T ss_dssp SSSCEEEEEEECTTCEEEEEEET-TSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTT
T ss_pred CCCCEEEEEECCCHHEEEEEECC-CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
T ss_conf 64878999990612128889949-99999999946899665899999999999999999974999776444433423665
Q ss_pred EECCCEEEECCCCCCCCHHHHHH--HHCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCEEE
Q ss_conf 41685564213566669889999--8289855882126543200001586553530243455766675279931762022
Q gi|254780280|r 78 IGDQKSFTLTNYHWVIDPEELIS--RMQFEDVLLINDFEAQALAICSLSCSNYVSIGQFVEDNRSLFSSRVIVGPGTGLG 155 (348)
Q Consensus 78 v~~~~~~~~~~~~~~~~~~~l~~--~~~~~~v~i~ND~~a~a~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ig~GtG~g 155 (348)
+....... ....... .....+|.+.||.++.++++... . .+.+..|||.+
T Consensus 82 ~~~~~~~~--------~~~~~~~~~~~~~~~v~i~nDa~a~~~~~~~~------------------~--~~~~~~gtg~~ 133 (347)
T 2ch5_A 82 DQEDAGRI--------LIEELRDRFPYLSESYLITTDAAGSIATATPD------------------G--GVVLISGTGSN 133 (347)
T ss_dssp TCHHHHHH--------HHHHHHHHCTTSBSCEEEEEHHHHHHHHHCSS------------------C--EEEEEESSSEE
T ss_pred CCCCCCEE--------CCCHHHHHCCCCCCEEEEECHHHHHHHHHCCC------------------C--CEEEEECCCEE
T ss_conf 57531211--------14123343257787199956699988764059------------------9--48999702589
Q ss_pred EEEEECCC--CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH------HHHHHHCCCCCC
Q ss_conf 45431058--8630113567866667661023478999985318986487752222389999------999874088864
Q gi|254780280|r 156 ISSVIRAK--DSWIPISCEGGHMDIGPSTQRDYEIFPHLTERAEGRLSAENLLSGKGLVNIY------KALCIADGFESN 227 (348)
Q Consensus 156 ~~~~~~~~--~g~~~~agE~Gh~~~~~~~~~~~~~~~~l~~~~g~~~~~E~~~SG~gl~~~y------~~l~~~~~~~~~ 227 (348)
........ .+...+..+.||..................+.|....|.+...+...+...+ ..+.........
T Consensus 134 ~~~~~~~~~~~~~~g~g~~~G~~~~~~~ig~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (347)
T 2ch5_A 134 CRLINPDGSESGCGGWGHMMGDEGSAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDK 213 (347)
T ss_dssp EEEECTTSCEEEEECCCTTTCCTTSHHHHHHHHHHHHHHHHHTSSCCSSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCH
T ss_pred EEEEECCCCEEEECCCCEEECCCCCCCCHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH
T ss_conf 99997697169954753113345766400012202322147887665411689999999760899779999998616783
Q ss_pred CC----CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-------EEEECHHHHHHHHHHCCHHHHHHHH
Q ss_conf 36----988899883689579999999999999999999997489973-------8996567765567727648999988
Q gi|254780280|r 228 KV----LSSKDIVSKSEDPIALKAINLFCEYLGRVAGDLALIFMARGG-------VYISGGIPYKIIDLLRNSSFRESFE 296 (348)
Q Consensus 228 ~~----~~~~~~~~~~~D~~A~~~~~~~~~~lg~~i~~l~~~~~p~~~-------IvlgGGi~~~~~~~l~~~~f~~~f~ 296 (348)
.. ......++++||+.|++++++++++||+.+++++++++|+.. ||||||++.+...++ +.|++.+.
T Consensus 214 ~~~a~~~~~v~~~A~~GD~~A~~ii~~~~~~Lg~~ia~~~~~ldP~~~~~~~~~~VVlgGgv~~~~~~l~--~~~~~~l~ 291 (347)
T 2ch5_A 214 CRFAGFCRKIAEGAQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLK--EGFLLALT 291 (347)
T ss_dssp HHHHTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCHHHCCHHHH--HHHHHHHH
T ss_conf 4566650444788877899999999999999999999999851936434788854999860574887899--99999998
Q ss_pred HCCCHHHHHHHC-CEEEEECCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 379837889738-879995787227759998738001244457
Q gi|254780280|r 297 NKSPHKELMRQI-PTYVITNPYIAIAGMVSYIKMTDCFNLFIS 338 (348)
Q Consensus 297 ~~~~~~~~l~~i-pv~~~~~~~agl~GAa~~~r~~~~~~~~~~ 338 (348)
++... ...... .++++..++++++||+.+++++....++.+
T Consensus 292 ~~~~~-~~~~~~~~v~~~~~~~~~~~GAa~LA~~~~~~~l~~~ 333 (347)
T 2ch5_A 292 QGREI-QAQNFFSSFTLMKLRHSSALGGASLGARHIGHLLPMD 333 (347)
T ss_dssp HHC----CCCSCSEEEEEEESSCTHHHHHHHHHHTTTCCCCCC
T ss_pred HHCCC-CCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf 63221-1025677069964898759999999998659977887