RPSBLAST alignment of GI: 254780280 and protein with PDBid: 1z05

>1z05_A Transcriptional regulator, ROK family; structural genomics, PSI, protein structure initiative; 2.00A {Vibrio cholerae o1 biovar eltor str} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Length = 429

 Score = 44.5 bits (104), Expect = 3e-05
 Identities = 36/277 (12%), Positives = 79/277 (28%), Gaps = 20/277 (7%)

Query: 10  PIAFPVLLADIGGTNVRFAIL-RSMESEPEFCCTVQTSDYENLEHAIQEVIYRKISIRLR 68
            + +  L   +G   +  A+     E   +    +   D +++   +   I         
Sbjct: 105 NLGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAA 164

Query: 69  SAFLAIATPIGDQKSFTLTNYHWVIDPEELISRMQFEDVLLINDFEAQALAICSLSCSNY 128
                 +  I             +  P   +  +     +         +A  + + +  
Sbjct: 165 QLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALA 224

Query: 129 VSIGQFVEDNRSLFSSRVIVGPGTGLGISSVIRAKDSWIPISCEGGHMDIGPSTQRDYEI 188
             +    +D  +     +  G G G          D  +     G   ++G       +I
Sbjct: 225 EKLFGHSQDVDNSVLISIHHGLGAG-------IVLDGRVLQGRHGNIGELGH-----IQI 272

Query: 189 FPHLTERAEGRLSAEN-LLSGKGLVNIYKALCIA---DGFESNKVLSSKDIVSKSED--P 242
            P       G       + S + + +   A   A       + + +S +DI + + D  P
Sbjct: 273 DPQGKRCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADGDP 332

Query: 243 IALKAINLFCEYLGRVAGDLALIFMARGGVYISGGIP 279
           +A+  I     YLG     +  +F     + I G I 
Sbjct: 333 LAVDVIQQLGRYLGAAIAIVINLFNPE-KILIGGVIN 368