HHsearch alignment for GI: 254780281 and conserved domain: PRK13728
>PRK13728 conjugal transfer protein TrbB; Provisional.
Probab=96.62 E-value=0.065 Score=32.41 Aligned_cols=116 Identities=17% Similarity=0.311 Sum_probs=72.6
Q ss_pred EEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCC
Q ss_conf 79829997967788499679999604777654468888776555430244333058876514333330577777531368
Q gi|254780281|r 40 HLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSD 119 (201)
Q Consensus 40 ~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~ 119 (201)
T Consensus 57 ~~~LsdGr~vnl~d----y~lV~F~rS~CP-yChqFAP~Lk~~a~~~g-----i~V~~~SlDG~g~-----~~----FP~ 117 (181)
T PRK13728 57 WFRLSNGRQVNLAD----WKVVLFMQGHCP-YCHQFDPVLKQLAQQYG-----FSVFPYTLDGQGD-----TA----FPE 117 (181)
T ss_pred CEECCCCCEECCCC----EEEEEEECCCCC-HHHHHCHHHHHHHHHHC-----CEEEEEEECCCCC-----CC----CCC
T ss_conf 25889996862434----189999738892-57765889999999859-----7179985369888-----78----886
Q ss_pred CEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEE-EEECCCCCHHHHHHHHHHHHHH
Q ss_conf 6422458988989888860908862256556777752587420699985898299-9857898889999999999851
Q gi|254780281|r 120 RIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIV-GVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 120 ~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~-~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
T Consensus 118 ~---lPaTpei~~tf---F~----n~~-----------~-~tPatFLvNvnT~~ayPv~qG~~~~~~l~~R~d~v~~~ 173 (181)
T PRK13728 118 A---LPAPPDVMQTF---FP----NIP-----------V-ATPTTFLVNVNTLEALPLLQGATDAAGFMARMDTVLQM 173 (181)
T ss_pred C---CCCCHHHHHHH---CC----CCC-----------C-CCCEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 7---77987999997---47----898-----------7-88616997337411001111655789999999999998