HHsearch alignment for GI: 254780281 and conserved domain: PRK13728

>PRK13728 conjugal transfer protein TrbB; Provisional.
Probab=96.62  E-value=0.065  Score=32.41  Aligned_cols=116  Identities=17%  Similarity=0.311  Sum_probs=72.6

Q ss_pred             EEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCC
Q ss_conf             79829997967788499679999604777654468888776555430244333058876514333330577777531368
Q gi|254780281|r   40 HLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSD  119 (201)
Q Consensus        40 ~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~  119 (201)
T Consensus        57 ~~~LsdGr~vnl~d----y~lV~F~rS~CP-yChqFAP~Lk~~a~~~g-----i~V~~~SlDG~g~-----~~----FP~  117 (181)
T PRK13728         57 WFRLSNGRQVNLAD----WKVVLFMQGHCP-YCHQFDPVLKQLAQQYG-----FSVFPYTLDGQGD-----TA----FPE  117 (181)
T ss_pred             CEECCCCCEECCCC----EEEEEEECCCCC-HHHHHCHHHHHHHHHHC-----CEEEEEEECCCCC-----CC----CCC
T ss_conf             25889996862434----189999738892-57765889999999859-----7179985369888-----78----886


Q ss_pred             CEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEE-EEECCCCCHHHHHHHHHHHHHH
Q ss_conf             6422458988989888860908862256556777752587420699985898299-9857898889999999999851
Q gi|254780281|r  120 RIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIV-GVIPYKDDSDSAIEKINRLITY  196 (201)
Q Consensus       120 ~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~-~~~~~~~~~~~i~~~i~~ll~~  196 (201)
T Consensus       118 ~---lPaTpei~~tf---F~----n~~-----------~-~tPatFLvNvnT~~ayPv~qG~~~~~~l~~R~d~v~~~  173 (181)
T PRK13728        118 A---LPAPPDVMQTF---FP----NIP-----------V-ATPTTFLVNVNTLEALPLLQGATDAAGFMARMDTVLQM  173 (181)
T ss_pred             C---CCCCHHHHHHH---CC----CCC-----------C-CCCEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf             7---77987999997---47----898-----------7-88616997337411001111655789999999999998