HHsearch alignment for GI: 254780281 and conserved domain: TIGR02661
>TIGR02661 MauD methylamine dehydrogenase accessory protein MauD; InterPro: IPR013478 MauD appears critical to proper formation of the small subunit of methylamine dehydrogenase, which has both an unusual tryptophan tryptophylquinone cofactor and multiple disulphide bonds. MauD shares sequence similarity, including a CPxC motif, with a number of thiol:disulphide interchange proteins. In MauD mutants, the small subunit apparently does not form properly and is rapidly degraded .; GO: 0030416 methylamine metabolic process.
Probab=98.38 E-value=1.2e-06 Score=60.86 Aligned_cols=110 Identities=20% Similarity=0.318 Sum_probs=81.3
Q ss_pred CCCCCCEEEECCCCCEECH--HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC-CHHH
Q ss_conf 6667870798299979677--884996799996047776544688887765554302443330588765143333-3057
Q gi|254780281|r 33 RRFNSDVHLVAQDGTDFSL--SSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRD-TPEV 109 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~~~~~--~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rD-t~e~ 109 (201)
T Consensus 49 G~~aP~F~l~~f~G~~V~iG~~~a~~R~~LLMFTaPsCP-vC~KL~PiIkSia~~-----E~~~Vv~IS-----DG~~~E 117 (189)
T TIGR02661 49 GDAAPIFNLPDFDGEPVRIGGSIALGRPTLLMFTAPSCP-VCDKLLPIIKSIARA-----EEIDVVLIS-----DGTPEE 117 (189)
T ss_pred CCCCCEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCC-HHHHHHHHHHHHHHH-----HCCCEEEEE-----CCCCHH
T ss_conf 555871057666786456117556777503544388885-322432789888867-----253258972-----799279
Q ss_pred HHHHHHHCCCC-EECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEE
Q ss_conf 77775313686-42245898898988886090886225655677775258742069998589829998
Q gi|254780281|r 110 MKKFVQRFSDR-IIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGV 176 (201)
Q Consensus 110 l~~y~~~~~~~-~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~ 176 (201)
T Consensus 118 Hr~FL~~H~L~~~~Y---------VVSAE~GM~--------------fQV~KiPYGVLLD~~G~I~AK 162 (189)
T TIGR02661 118 HRRFLKDHELGEERY---------VVSAEIGMA--------------FQVGKIPYGVLLDQDGVIRAK 162 (189)
T ss_pred HHHHHHCCCCCCEEE---------EEEECCCCC--------------CCCCCCCCEEEECCCCEEEEC
T ss_conf 998864288887137---------886202210--------------011225622566799747742