HHsearch alignment for GI: 254780281 and conserved domain: cd02966

>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=99.74  E-value=7.1e-18  Score=128.71  Aligned_cols=115  Identities=24%  Similarity=0.322  Sum_probs=96.0

Q ss_pred             CEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHC
Q ss_conf             70798299979677884996799996047776544688887765554302443330588765143333305777775313
Q gi|254780281|r   38 DVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRF  117 (201)
Q Consensus        38 ~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~  117 (201)
T Consensus         1 df~l~d~~G~~~~l~~~~gk~~vl~f~a~wC~-~C~~~~~~l~~~~~~~~~~--~v~vi~i~~~~--~~~~~~~~~~~~~   75 (116)
T cd02966           1 DFSLPDLDGKPVSLSDLKGKVVLVNFWASWCP-PCRAEMPELEALAKEYKDD--GVEVVGVNVDD--DDPAAVKAFLKKY   75 (116)
T ss_pred             CCCEECCCCCEEEHHHHCCCEEEEEEECCCCC-CCCCCCCCEEEEECCCCCC--CCEEEEEECCC--CCHHHHHHHHHHC
T ss_conf             92158799299859997999599999927899-7545364202330134456--41389997887--8889999988743


Q ss_pred             CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC
Q ss_conf             6864224589889898888609088622565567777525874206999858982999857
Q gi|254780281|r  118 SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP  178 (201)
Q Consensus       118 ~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~  178 (201)
T Consensus        76 ~~~~p~~~D~~---~~~~~~~~v~------------------~~P~~~iid~~G~i~~~~~  115 (116)
T cd02966          76 GITFPVLLDPD---GELAKAYGVR------------------GLPTTFLIDRDGRIRARHV  115 (116)
T ss_pred             CCCEEEEECCC---CHHHHHCCCC------------------CCCEEEEECCCCEEEEEEE
T ss_conf             98338998698---5289984998------------------0457999999999999997