HHsearch alignment for GI: 254780281 and conserved domain: cd02994
>cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX. TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC.
Probab=96.86 E-value=0.014 Score=36.49 Aligned_cols=86 Identities=14% Similarity=0.118 Sum_probs=55.1
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHH
Q ss_conf 49967999960477765446888877655543024433305887651433333057777753136864224589889898
Q gi|254780281|r 54 LYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133 (201)
Q Consensus 54 ~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~ 133 (201)
T Consensus 15 ~~g~~-lV~FyApWC~-~Ck~l~P~~e~la~~~~~--~~v~i~~vD~~---~~-------------------------~~ 62 (101)
T cd02994 15 LEGEW-MIEFYAPWCP-ACQQLQPEWEEFADWSDD--LGINVAKVDVT---QE-------------------------PG 62 (101)
T ss_pred HCCCE-EEEEECCCCH-HHHHHHHHHHHHHHHCCC--CCEEEEEECCC---CC-------------------------HH
T ss_conf 38988-9999899873-577774899999986467--87799990175---59-------------------------65
Q ss_pred HHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHH
Q ss_conf 8886090886225655677775258742069998589829998578988899999999
Q gi|254780281|r 134 VAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKIN 191 (201)
Q Consensus 134 l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~ 191 (201)
T Consensus 63 l~~~~~I~------------------~~PTi~~~-~~G~~~-~y~G~rt~~~l~~fi~ 100 (101)
T cd02994 63 LSGRFFVT------------------ALPTIYHA-KDGVFR-RYQGPRDKEDLISFIE 100 (101)
T ss_pred HHHHCCEE------------------EEEEEEEE-ECCCEE-EEECCCCHHHHHHHHH
T ss_conf 78547807------------------84189998-199386-6147999999999970