HHsearch alignment for GI: 254780281 and conserved domain: cd03002
>cd03002 PDI_a_MPD1_like PDI family, MPD1-like subfamily; composed of eukaryotic proteins similar to Saccharomyces cerevisiae MPD1 protein, which contains a single redox active TRX domain located at the N-terminus, and an ER retention signal at the C-terminus indicative of an ER-resident protein. MPD1 has been shown to suppress the maturation defect of carboxypeptidase Y caused by deletion of the yeast PDI1 gene. Other characterized members of this subfamily include the Aspergillus niger prpA protein and Giardia PDI-1. PrpA is non-essential to strain viability, however, its transcript level is induced by heterologous protein expression suggesting a possible role in oxidative protein folding during high protein production. Giardia PDI-1 has the ability to refold scrambled RNase and exhibits transglutaminase activity.
Probab=96.06 E-value=0.051 Score=33.02 Aligned_cols=43 Identities=19% Similarity=0.255 Sum_probs=35.1
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf 99679999604777654468888776555430244333058876514
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVD 101 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvD 101 (201)
T Consensus 17 ~~~~~lV~FyApWC~-~Ck~~~P~~~~~a~~~~~---~~~~~~vd~d 59 (109)
T cd03002 17 TNYTTLVEFYAPWCG-HCKNLKPEYAKAAKELDG---LVQVAAVDCD 59 (109)
T ss_pred CCCCEEEEEECCCCC-CHHHHHHHHHHHHHHHCC---CCEEEEEECC
T ss_conf 998399999888681-167767999999998088---7228999656