HHsearch alignment for GI: 254780281 and conserved domain: pfam05988
>pfam05988 DUF899 Bacterial protein of unknown function (DUF899). This family consists of several uncharacterized bacterial proteins of unknown function.
Probab=95.87 E-value=0.11 Score=30.95 Aligned_cols=122 Identities=16% Similarity=0.263 Sum_probs=73.7
Q ss_pred CCCCCEEEECCCCCEECHHH-HCCCEE-EEE-EEC-----CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC
Q ss_conf 66787079829997967788-499679-999-604-----7776544688887765554302443330588765143333
Q gi|254780281|r 34 RFNSDVHLVAQDGTDFSLSS-LYIKPS-IVF-FGF-----TNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRD 105 (201)
Q Consensus 34 ~~~~~f~L~d~~G~~~~~~~-~~Gk~~-li~-F~~-----T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rD 105 (201)
T Consensus 44 ~V~k~Y~F~gp~G~-v~L~dLF~GR~qLivYhfMf~P~~~~~C~-gCS~~~D~~~g~l~hL~--~rd~t~a~vs----ra 115 (211)
T pfam05988 44 EVDKDYRFDGPDGP-VTLADLFGGRSQLIVYHFMFGPGWEAGCP-GCSFLADHFDGALAHLA--ARDVALAAVS----RA 115 (211)
T ss_pred ECCCCEEEECCCCC-EEHHHHHCCCCEEEEEEEECCCCCCCCCC-CCHHHHHCCCCHHHHHH--HCCCEEEEEE----CC
T ss_conf 74787587689985-32899809974289999702789889999-72224527561377887--2783699993----79
Q ss_pred CHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC
Q ss_conf 3057777753136864224589889898888609088622565567777525874206999858982999857
Q gi|254780281|r 106 TPEVMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP 178 (201)
Q Consensus 106 t~e~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~ 178 (201)
T Consensus 116 P~~~l~~~k~rmGW~~pw~Ss~~s---~Fn~D~~v~~~~---~~-e-------~pg~svF~rd~-g~Vfhtys 173 (211)
T pfam05988 116 PLAELVAYKRRMGWTFPWYSSVGS---DFNRDFGVSFTE---EG-E-------RPGLSVFLRDG-GRVFHTYS 173 (211)
T ss_pred CHHHHHHHHHHCCCCCEEEECCCC---CCCCCCCCCCCC---CC-C-------CCCEEEEEECC-CEEEEEEC
T ss_conf 899999999975997147865897---665314752178---78-7-------76158999769-98999652