HHsearch results for GI: 254780281 and protein with PDBid: 1n8j_A
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.67 E-value=1.6e-15 Score=113.16 Aligned_cols=139 Identities=17% Similarity=0.149 Sum_probs=106.9
Q ss_pred CCCCCEEEEC-CCC--CEECHHHHCCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
Q ss_conf 6678707982-999--796778849967999960-477765446888877655543024433305887651433333057
Q gi|254780281|r 34 RFNSDVHLVA-QDG--TDFSLSSLYIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEV 109 (201)
Q Consensus 34 ~~~~~f~L~d-~~G--~~~~~~~~~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~ 109 (201)
...|+|++.. .+| .++++++|+|||++++|+ ..+|| +|+.++..+++.++++.+. +++++.||+ |+++.
T Consensus 5 ~kaP~F~~~a~~~g~~~~vslsd~~Gk~vVL~FyP~~ftp-~C~~E~~~~~~~~~~f~~~--~~~vvgIS~----D~~~s 77 (186)
T 1n8j_A 5 TKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTF-VSPTELGDVADHYEELQKL--GVDVYSVST----DTHFT 77 (186)
T ss_dssp CBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCS-HHHHHHHHHHHHHHHHHHT--TEEEEEEES----SCHHH
T ss_pred CCCCCCEEEEEECCEEEEEEHHHHCCCEEEEEEEECCCCC-CCHHHHHHHHHHHHHHCCC--CEEEEEECC----CCHHH
T ss_conf 7089987576678905797689969994999998157896-3799999999877874168--838986458----84665
Q ss_pred HHHHHHHC----CCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC----CCC
Q ss_conf 77775313----6864224589889898888609088622565567777525874206999858982999857----898
Q gi|254780281|r 110 MKKFVQRF----SDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP----YKD 181 (201)
Q Consensus 110 l~~y~~~~----~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~----~~~ 181 (201)
.++|++.+ ..+++.|..... .+++.||++.... .+ ....+|+|||+|+++..+- .+.
T Consensus 78 h~~w~~~~~~~~~~~fpllsD~~~---~v~k~ygv~~~~~---------g~---~~r~tfiID~~G~Ir~~~~~~~~~~r 142 (186)
T 1n8j_A 78 HKAWHSSSETIAKIKYAMIGDPTG---ALTRNFDNMREDE---------GL---ADRATFVVDPQGIIQAIEVTAEGIGR 142 (186)
T ss_dssp HHHHHHHCTTGGGCCSEEEECTTS---HHHHHTTCEETTT---------TE---ECEEEEEECTTSBEEEEEEECTTBCC
T ss_pred HHHHHHHHHHCCCCCCCCCCCHHH---HHHHHCCCCCCCC---------CC---CEEEEEEECCCCEEEEEEECCCCCCC
T ss_conf 899873132036656675423789---9999839975557---------86---13358999999979999983899898
Q ss_pred CHHHHHHHHHHHH
Q ss_conf 8899999999998
Q gi|254780281|r 182 DSDSAIEKINRLI 194 (201)
Q Consensus 182 ~~~~i~~~i~~ll 194 (201)
+.+++++.|+.|-
T Consensus 143 ~~~EiLr~l~alq 155 (186)
T 1n8j_A 143 DASDLLRKIKAAQ 155 (186)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
T ss_conf 9999999999853