HHsearch results for GI: 254780281 and protein with PDBid: 1psq_A

>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.64  E-value=2.4e-15  Score=112.14  Aligned_cols=139  Identities=18%  Similarity=0.181  Sum_probs=97.7

Q ss_pred             CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEEC-CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf             6666787079829997967788499679999604-777654468888776555430244333058876514333330577
Q gi|254780281|r   32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGF-TNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM  110 (201)
Q Consensus        32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~-T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l  110 (201)
                      ....+|+|+|.|.+|+.+++++|+|||++++|+. +||| .|..+++.+++.+.++.    .+.++.||.    |+++.+
T Consensus        18 vG~~aP~F~l~~~dg~~vsL~d~~Gk~~Vl~f~~~~~cp-~C~~e~~~l~~~~~~~~----~~~~v~Vs~----d~~~~~   88 (163)
T 1psq_A           18 VGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTG-ICSTQTRRFNEELAGLD----NTVVLTVSM----DLPFAQ   88 (163)
T ss_dssp             TTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSH-HHHHHHHHHHHHTTTCT----TEEEEEEES----SCHHHH
T ss_pred             CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEEECCCCC-CCCHHHHHHHHHHHHHC----CEEEEEEEE----CCHHHH
T ss_conf             989998749989999998589909987999983377576-03332999999987416----515999980----818999


Q ss_pred             HHHHHHCCC-CEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE--CC---CCCHH
Q ss_conf             777531368-6422458988989888860908862256556777752587420699985898299985--78---98889
Q gi|254780281|r  111 KKFVQRFSD-RIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI--PY---KDDSD  184 (201)
Q Consensus       111 ~~y~~~~~~-~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~--~~---~~~~~  184 (201)
                      +++.+.... .+..+.....  ..+++.||+......     .       ....+||||++|+|+-..  +.   ..+.+
T Consensus        89 ~~~~~~~~~~~~~~l~d~~~--~~~~~~yg~~~~~~~-----~-------~~Rs~fvID~~G~I~y~~~~~~~~~~~~~~  154 (163)
T 1psq_A           89 KRWCGAEGLDNAIMLSDYFD--HSFGRDYALLINEWH-----L-------LARAVFVLDTDNTIRYVEYVDNINSEPNFE  154 (163)
T ss_dssp             HHHHHHHTCTTSEEEECTTT--CHHHHHHTCBCTTTC-----S-------BCCEEEEECTTCBEEEEEECSBTTSCCCHH
T ss_pred             HHHHHHCCCCCCEEEECCCC--HHHHHHHHEECCCCC-----C-------EEEEEEEECCCCEEEEEEECCCCCCCCCHH
T ss_conf             99999729966266530222--689987420015688-----0-------367999999999899999748988889999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999999
Q gi|254780281|r  185 SAIEKINRL  193 (201)
Q Consensus       185 ~i~~~i~~l  193 (201)
                      ++++.++.|
T Consensus       155 ~vl~~lk~L  163 (163)
T 1psq_A          155 AAIAAAKAL  163 (163)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHCC
T ss_conf             999999659