HHsearch results for GI: 254780281 and protein with PDBid: 1psq_A
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.64 E-value=2.4e-15 Score=112.14 Aligned_cols=139 Identities=18% Similarity=0.181 Sum_probs=97.7
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEEC-CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
Q ss_conf 6666787079829997967788499679999604-777654468888776555430244333058876514333330577
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGF-TNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVM 110 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~-T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l 110 (201)
....+|+|+|.|.+|+.+++++|+|||++++|+. +||| .|..+++.+++.+.++. .+.++.||. |+++.+
T Consensus 18 vG~~aP~F~l~~~dg~~vsL~d~~Gk~~Vl~f~~~~~cp-~C~~e~~~l~~~~~~~~----~~~~v~Vs~----d~~~~~ 88 (163)
T 1psq_A 18 VGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTG-ICSTQTRRFNEELAGLD----NTVVLTVSM----DLPFAQ 88 (163)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSH-HHHHHHHHHHHHTTTCT----TEEEEEEES----SCHHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEEECCCCC-CCCHHHHHHHHHHHHHC----CEEEEEEEE----CCHHHH
T ss_conf 989998749989999998589909987999983377576-03332999999987416----515999980----818999
Q ss_pred HHHHHHCCC-CEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEE--CC---CCCHH
Q ss_conf 777531368-6422458988989888860908862256556777752587420699985898299985--78---98889
Q gi|254780281|r 111 KKFVQRFSD-RIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVI--PY---KDDSD 184 (201)
Q Consensus 111 ~~y~~~~~~-~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~--~~---~~~~~ 184 (201)
+++.+.... .+..+..... ..+++.||+...... . ....+||||++|+|+-.. +. ..+.+
T Consensus 89 ~~~~~~~~~~~~~~l~d~~~--~~~~~~yg~~~~~~~-----~-------~~Rs~fvID~~G~I~y~~~~~~~~~~~~~~ 154 (163)
T 1psq_A 89 KRWCGAEGLDNAIMLSDYFD--HSFGRDYALLINEWH-----L-------LARAVFVLDTDNTIRYVEYVDNINSEPNFE 154 (163)
T ss_dssp HHHHHHHTCTTSEEEECTTT--CHHHHHHTCBCTTTC-----S-------BCCEEEEECTTCBEEEEEECSBTTSCCCHH
T ss_pred HHHHHHCCCCCCEEEECCCC--HHHHHHHHEECCCCC-----C-------EEEEEEEECCCCEEEEEEECCCCCCCCCHH
T ss_conf 99999729966266530222--689987420015688-----0-------367999999999899999748988889999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780281|r 185 SAIEKINRL 193 (201)
Q Consensus 185 ~i~~~i~~l 193 (201)
++++.++.|
T Consensus 155 ~vl~~lk~L 163 (163)
T 1psq_A 155 AAIAAAKAL 163 (163)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHCC
T ss_conf 999999659