HHsearch results for GI: 254780281 and protein with PDBid: 1sen_A
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=97.79 E-value=1.9e-05 Score=52.35 Aligned_cols=102 Identities=11% Similarity=0.173 Sum_probs=61.1
Q ss_pred CEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCC
Q ss_conf 79677884996799996047776544688887765554302443330588765143333305777775313686422458
Q gi|254780281|r 47 TDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISG 126 (201)
Q Consensus 47 ~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg 126 (201)
+.+....-.||+++|.|+.+||+ .|-...+.+.+..+... . +.++++|.+|-+.. ..+.+|...
T Consensus 37 eal~~Ak~~~Kpvlv~F~a~WC~-~Ck~~~~~~~~~~~v~~-~--~~~fv~v~vD~~~~--~~~~~~~~~---------- 100 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCG-ACKALKPKFAESTEISE-L--SHNFVMVNLEDEEE--PKDEDFSPD---------- 100 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCH-HHHHHHHHHHTCHHHHH-H--HTTSEEEEEEGGGS--CSCGGGCTT----------
T ss_pred HHHHHHHHCCCCEEEEECCCCCC-CCCCCHHHCCCCHHHHH-H--HCCEEEECCCCCCC--HHHHHHHHC----------
T ss_conf 99999998199799998889882-71257301344499996-2--08889821777747--589998742----------
Q ss_pred CHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC----------CCCHHHHHHHHHHHHH
Q ss_conf 98898988886090886225655677775258742069998589829998578----------9888999999999985
Q gi|254780281|r 127 DPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY----------KDDSDSAIEKINRLIT 195 (201)
Q Consensus 127 ~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~----------~~~~~~i~~~i~~ll~ 195 (201)
. .+ .++++++||+|+.+..+.+ ..+.+.+++.+++.+.
T Consensus 101 -------------~--------------~~----~Pt~~fld~~G~~~~~~~G~~~~~~~~~~~~~~~~~~~~~k~~~e 148 (164)
T 1sen_A 101 -------------G--------------GY----IPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp -------------C--------------SC----SSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred -------------C--------------CC----CEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf -------------6--------------76----428999847991866742788886411367799999999999999