HHsearch results for GI: 254780281 and protein with PDBid: 1syr_A
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum 3D7} SCOP: c.47.1.1
Probab=97.40 E-value=0.0008 Score=42.63 Aligned_cols=85 Identities=16% Similarity=0.166 Sum_probs=55.4
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.++.++|+|+.+||+ .|....+.+.++.++++ +++++.|.+| +.+ .+
T Consensus 25 ~~~~vvv~F~a~wC~-~C~~~~p~l~~l~~~~~----~v~~~~vd~d---~~~-------------------------~l 71 (112)
T 1syr_A 25 QNELVIVDFFAEWCG-PCKRIAPFYEECSKTYT----KMVFIKVDVD---EVS-------------------------EV 71 (112)
T ss_dssp HCSEEEEEEECTTCH-HHHHHHHHHHHHHHHCT----TSEEEEEETT---TTH-------------------------HH
T ss_pred CCCCEEEEEECCCCC-CHHHCCCCCHHHHHCCC----CCEEEECCCC---CCH-------------------------HH
T ss_conf 899799999899985-54413764101221167----5126752453---389-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 8860908862256556777752587420699985898299985789888999999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINR 192 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ 192 (201)
++.|++.. .+++.++ ++|+.+..+.+ .+++++.+-|++
T Consensus 72 ~~~~~V~~------------------~PTi~~~-k~G~~v~~~~G-~~~~~l~~~i~k 109 (112)
T 1syr_A 72 TEKENITS------------------MPTFKVY-KNGSSVDTLLG-ANDSALKQLIEK 109 (112)
T ss_dssp HHHTTCCS------------------SSEEEEE-ETTEEEEEEES-CCHHHHHHHHHT
T ss_pred HHHCCCEE------------------ECEEEEE-ECCEEEEEEEC-CCHHHHHHHHHH
T ss_conf 99869918------------------4669999-89999999949-298999999998