HHsearch results for GI: 254780281 and protein with PDBid: 1v98_A
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus HB8}
Probab=98.54 E-value=6.3e-07 Score=61.33 Aligned_cols=109 Identities=18% Similarity=0.220 Sum_probs=76.7
Q ss_pred CCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 87079829997967788499679999604777654468888776555430244333058876514333330577777531
Q gi|254780281|r 37 SDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQR 116 (201)
Q Consensus 37 ~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~ 116 (201)
+...+++.+.+.+...-..+|.++|+||.+||+ .|....+.+.++.+++.. ++.++.|.+| +.+
T Consensus 31 p~~~vi~l~~~~f~~~i~~~k~vlV~F~a~WC~-~Ck~~~p~l~~~~~~~~~---~v~~~~id~~---~~~--------- 94 (140)
T 1v98_A 31 PLPWVVEADEKGFAQEVAGAPLTLVDFFAPWCG-PCRLVSPILEELARDHAG---RLKVVKVNVD---EHP--------- 94 (140)
T ss_dssp ------------------CCCEEEEEEECTTCH-HHHHHHHHHHHHHHHTTT---TEEEEEEETT---TCH---------
T ss_pred CCCCEEECCHHHHHHHHHCCCCEEEEEECCCCH-HHHHHCCCHHHHHHHHCC---EEEEEEEECC---CCH---------
T ss_conf 998209867899999985699799999899997-688446410488874063---6899999555---568---------
Q ss_pred CCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 36864224589889898888609088622565567777525874206999858982999857898889999999999851
Q gi|254780281|r 117 FSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITY 196 (201)
Q Consensus 117 ~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~ 196 (201)
.+++.|++. ..++++++ .+|+.+..+.+..+.+.+.+.|+++|..
T Consensus 95 ----------------~l~~~~~V~------------------~~Pt~~~~-k~G~~v~~~~G~~~~~~l~~~I~~~L~~ 139 (140)
T 1v98_A 95 ----------------GLAARYGVR------------------SVPTLVLF-RRGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp ----------------HHHHHTTCC------------------SSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred ----------------HHHHHHCCC------------------CCCEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf ----------------889982977------------------34869999-8999989997999999999999998775