HHsearch results for GI: 254780281 and protein with PDBid: 1zma_A
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.95 E-value=5.8e-05 Score=49.49 Aligned_cols=88 Identities=15% Similarity=0.240 Sum_probs=60.3
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.++..+++||.+||| .|....+.+.++.++.+ ..+.+|.+|-..| .+....+
T Consensus 28 ~~~~~~v~f~~~~C~-~C~~~~p~l~~~~~~~~-----~~i~~v~~~~~~~----------------------~~~~~~~ 79 (118)
T 1zma_A 28 KKETATFFIGRKTCP-YCRKFAGTLSGVVAETK-----AHIYFINSEEPSQ----------------------LNDLQAF 79 (118)
T ss_dssp TTCCEEEEEECTTCH-HHHHHHHHHHHHHHHHC-----CCCEEEETTCGGG----------------------HHHHHHH
T ss_pred CCCCEEEEEECCCCH-HHHHHHHHHHHHHHHHC-----CEEEEEEEECCCC----------------------HHHCCCC
T ss_conf 699699999799796-67611588899999840-----4345666403321----------------------1111244
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHH
Q ss_conf 8860908862256556777752587420699985898299985789888999999
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEK 189 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~ 189 (201)
++.|++.. .++++++ .+|+....+.+..++++|.+-
T Consensus 80 ~~~~~i~~------------------vPtl~~~-k~G~~~~~~~g~~s~~~i~~F 115 (118)
T 1zma_A 80 RSRYGIPT------------------VPGFVHI-TDGQINVRCDSSMSAQEIKDF 115 (118)
T ss_dssp HHHHTCCS------------------SCEEEEE-ETTEEEEECCTTCCHHHHHHH
T ss_pred CCCCCCCC------------------CCEEEEE-ECCEEEEEECCCCCHHHHHHH
T ss_conf 52230437------------------8779999-899899988898999999998