HHsearch results for GI: 254780281 and protein with PDBid: 2a4v_A
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.53 E-value=1.2e-13 Score=101.84 Aligned_cols=123 Identities=11% Similarity=0.007 Sum_probs=90.5
Q ss_pred CCCCCCCEEEECCCCCEECHHHH--CCCEEEEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHH
Q ss_conf 66667870798299979677884--9967999960-47776544688887765554302443330588765143333305
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSL--YIKPSIVFFG-FTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPE 108 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~--~Gk~~li~F~-~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e 108 (201)
.+..+|+|+|.|++|+.++++++ +|++++++|+ .+||| .|..+++.+++.++++.+ .+.++.||. |+++
T Consensus 9 vGd~aP~F~L~~~~G~~v~l~~~~~~~~~vv~ff~p~~~cp-~C~~e~~~~~~~~~~~~~---~~~v~~vs~----d~~~ 80 (159)
T 2a4v_A 9 IGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTP-GSTRQASGFRDNYQELKE---YAAVFGLSA----DSVT 80 (159)
T ss_dssp TTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSH-HHHHHHHHHHHHHHHHTT---TCEEEEEES----CCHH
T ss_pred CCCCCCCCEEECCCCCEEEHHHHCCCCCEEEEEECCCCCCC-CCHHHHHHHHHHHHHHCC---CCEEEEEEC----CHHH
T ss_conf 98988562888899899865997499768999837899899-744899999988998611---766999976----6189
Q ss_pred HHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC
Q ss_conf 7777753136864224589889898888609088622565567777525874206999858982999857
Q gi|254780281|r 109 VMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIP 178 (201)
Q Consensus 109 ~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~ 178 (201)
.+++|++.++-+|..|..... .+++.||+.-. +.. . .. ..++|+++|+++..+-
T Consensus 81 ~~~~f~~~~~~~fp~l~D~~~---~v~~~ygv~~~--~~~-------~---~~-r~~fii~dg~i~~~~~ 134 (159)
T 2a4v_A 81 SQKKFQSKQNLPYHLLSDPKR---EFIGLLGAKKT--PLS-------G---SI-RSHFIFVDGKLKFKRV 134 (159)
T ss_dssp HHHHHHHHHTCSSEEEECTTC---HHHHHHTCBSS--SSS-------C---BC-CEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHCCCCEEEEECCC---HHHHHCCCCCC--CCC-------C---EE-EEEEEEECCCEEEEEE
T ss_conf 999999985998469994985---89997499966--668-------7---12-6999997893999999