HHsearch results for GI: 254780281 and protein with PDBid: 2cvb_A

>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken structural genomics/proteomics initiative; 1.80A {Thermus thermophilus HB8} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.78  E-value=3.5e-18  Score=129.27  Aligned_cols=142  Identities=20%  Similarity=0.184  Sum_probs=110.4

Q ss_pred             CCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE-CC---CCCCHH
Q ss_conf             66678707982999796778849967999960477765446888877655543024433305887651-43---333305
Q gi|254780281|r   33 RRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITV-DP---KRDTPE  108 (201)
Q Consensus        33 ~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~Isv-DP---~rDt~e  108 (201)
                      ....|+|+|.|.+|+.+++++|+||++||+||.|||| .|-..++.|.++++++.+   ++++++|.. |+   ..|+++
T Consensus        10 G~~aPdF~L~d~~G~~~~Lsd~~gk~vvl~FwatwCp-~c~~~~p~l~~l~~~y~~---~v~~v~v~s~d~~~~~~~~~e   85 (188)
T 2cvb_A           10 ESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCP-YVKGSIGELVALAERYRG---KVAFVGINANDYEKYPEDAPE   85 (188)
T ss_dssp             TCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCH-HHHTTHHHHHHHHHHTTT---TEEEEEEECCCTTTCGGGSHH
T ss_pred             CCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CHHHHHHHCCCHHHHCCC---EEEEEEECCCCCCCCCCCCHH
T ss_conf             9937760856699999878996999599999898997-427876412200111043---047765303552222211488


Q ss_pred             HHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC--------C
Q ss_conf             77777531368642245898898988886090886225655677775258742069998589829998578--------9
Q gi|254780281|r  109 VMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY--------K  180 (201)
Q Consensus       109 ~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~--------~  180 (201)
                      .+++|.+.+.-+|..+.....+   +++.|++.                  +++.+||||++|+++-.-.-        .
T Consensus        86 ~~~~~~~~~~~~~p~l~D~~~~---~~~~~~v~------------------~~P~~~liD~~G~I~y~G~idd~~~~~~~  144 (188)
T 2cvb_A           86 KMAAFAEEHGIFFPYLLDETQE---VAKAYRAL------------------RTPEVFLFDERRLLRYHGRVNDNPKDPSK  144 (188)
T ss_dssp             HHHHHHHHHTCCSCEEECSSSH---HHHHTTCC------------------EESEEEEECTTCBEEEEECSSSCTTCGGG
T ss_pred             HHHHHHHHHCCCCEEEECCCCC---HHHHCCCC------------------EEEEEEEECCCCEEEEEEEECCCCCCCCC
T ss_conf             8999999829874047737765---11103654------------------47789998899869996364378878887


Q ss_pred             CCHHHHHHHHHHHHHHCCC
Q ss_conf             8889999999999851433
Q gi|254780281|r  181 DDSDSAIEKINRLITYGNV  199 (201)
Q Consensus       181 ~~~~~i~~~i~~ll~~~~~  199 (201)
                      .+...+.+.|+.|++.+.+
T Consensus       145 ~~~~~L~~Ai~~ll~g~~~  163 (188)
T 2cvb_A          145 VQSHDLEAAIEALLRGEEP  163 (188)
T ss_dssp             CCCCHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHCCCCC
T ss_conf             8889999999999838998