HHsearch results for GI: 254780281 and protein with PDBid: 2cvb_A
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken structural genomics/proteomics initiative; 1.80A {Thermus thermophilus HB8} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.78 E-value=3.5e-18 Score=129.27 Aligned_cols=142 Identities=20% Similarity=0.184 Sum_probs=110.4
Q ss_pred CCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE-CC---CCCCHH
Q ss_conf 66678707982999796778849967999960477765446888877655543024433305887651-43---333305
Q gi|254780281|r 33 RRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITV-DP---KRDTPE 108 (201)
Q Consensus 33 ~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~Isv-DP---~rDt~e 108 (201)
....|+|+|.|.+|+.+++++|+||++||+||.|||| .|-..++.|.++++++.+ ++++++|.. |+ ..|+++
T Consensus 10 G~~aPdF~L~d~~G~~~~Lsd~~gk~vvl~FwatwCp-~c~~~~p~l~~l~~~y~~---~v~~v~v~s~d~~~~~~~~~e 85 (188)
T 2cvb_A 10 ESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCP-YVKGSIGELVALAERYRG---KVAFVGINANDYEKYPEDAPE 85 (188)
T ss_dssp TCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCH-HHHTTHHHHHHHHHHTTT---TEEEEEEECCCTTTCGGGSHH
T ss_pred CCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CHHHHHHHCCCHHHHCCC---EEEEEEECCCCCCCCCCCCHH
T ss_conf 9937760856699999878996999599999898997-427876412200111043---047765303552222211488
Q ss_pred HHHHHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECC--------C
Q ss_conf 77777531368642245898898988886090886225655677775258742069998589829998578--------9
Q gi|254780281|r 109 VMKKFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPY--------K 180 (201)
Q Consensus 109 ~l~~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~--------~ 180 (201)
.+++|.+.+.-+|..+.....+ +++.|++. +++.+||||++|+++-.-.- .
T Consensus 86 ~~~~~~~~~~~~~p~l~D~~~~---~~~~~~v~------------------~~P~~~liD~~G~I~y~G~idd~~~~~~~ 144 (188)
T 2cvb_A 86 KMAAFAEEHGIFFPYLLDETQE---VAKAYRAL------------------RTPEVFLFDERRLLRYHGRVNDNPKDPSK 144 (188)
T ss_dssp HHHHHHHHHTCCSCEEECSSSH---HHHHTTCC------------------EESEEEEECTTCBEEEEECSSSCTTCGGG
T ss_pred HHHHHHHHHCCCCEEEECCCCC---HHHHCCCC------------------EEEEEEEECCCCEEEEEEEECCCCCCCCC
T ss_conf 8999999829874047737765---11103654------------------47789998899869996364378878887
Q ss_pred CCHHHHHHHHHHHHHHCCC
Q ss_conf 8889999999999851433
Q gi|254780281|r 181 DDSDSAIEKINRLITYGNV 199 (201)
Q Consensus 181 ~~~~~i~~~i~~ll~~~~~ 199 (201)
.+...+.+.|+.|++.+.+
T Consensus 145 ~~~~~L~~Ai~~ll~g~~~ 163 (188)
T 2cvb_A 145 VQSHDLEAAIEALLRGEEP 163 (188)
T ss_dssp CCCCHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHHHHCCCCC
T ss_conf 8889999999999838998