HHsearch results for GI: 254780281 and protein with PDBid: 3hdc_A
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.74 E-value=7.9e-18 Score=127.13 Aligned_cols=132 Identities=17% Similarity=0.202 Sum_probs=102.9
Q ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHH
Q ss_conf 66667870798299979677884996799996047776544688887765554302443330588765143333305777
Q gi|254780281|r 32 NRRFNSDVHLVAQDGTDFSLSSLYIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMK 111 (201)
Q Consensus 32 ~~~~~~~f~L~d~~G~~~~~~~~~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~ 111 (201)
.....|+|+|+|.+|+.+++++++||+++|+||++||| .|..+++.+.++++++.+. ++.++.|+.|.+ .+
T Consensus 17 vG~~aPdf~l~~~~G~~~~l~~~~gk~~vl~f~~~~C~-~C~~~~~~l~~~~~~~~~~--~~~vv~v~~d~~------~~ 87 (158)
T 3hdc_A 17 TGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCP-YCRDEMPSMDRLVKSFPKG--DLVVLAVNVEKR------FP 87 (158)
T ss_dssp TTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCH-HHHHHHHHHHHHHHHSSTT--SEEEEEEECSSS------CC
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCC-CHHHHCCCCCCCCCCCCCC--CCEEEEEECHHH------HH
T ss_conf 99999883878999699809996999799999898897-4044262110111001124--331478754087------89
Q ss_pred HHHHHCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCC--CCHHHHHHH
Q ss_conf 775313686422458988989888860908862256556777752587420699985898299985789--888999999
Q gi|254780281|r 112 KFVQRFSDRIIGISGDPIDVMRVAKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYK--DDSDSAIEK 189 (201)
Q Consensus 112 ~y~~~~~~~~~~ltg~~~~i~~l~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~--~~~~~i~~~ 189 (201)
++.+....+|..+...... +++.|++.. .+.+||||++|+++..+.+. .+.+++.+.
T Consensus 88 ~~~~~~~~~~p~~~D~~~~---~~~~~~v~~------------------~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~ 146 (158)
T 3hdc_A 88 EKYRRAPVSFNFLSDATGQ---VQQRYGANR------------------LPDTFIVDRKGIIRQRVTGGIEWDAPKVVSY 146 (158)
T ss_dssp GGGGGCCCSCEEEECTTSH---HHHHTTCCS------------------SSEEEEECTTSBEEEEEESCCCTTSHHHHHH
T ss_pred HHHHHCCCCCEEEECCCCH---HHHHCCCCC------------------CCEEEEECCCCEEEEEEECCCCCCHHHHHHH
T ss_conf 9998738850020077527---999859983------------------6879999799999999969999899999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780281|r 190 INRL 193 (201)
Q Consensus 190 i~~l 193 (201)
|+.|
T Consensus 147 l~~L 150 (158)
T 3hdc_A 147 LKSL 150 (158)
T ss_dssp HHTT
T ss_pred HHHC
T ss_conf 9977