HHsearch results for GI: 254780281 and protein with PDBid: 3hz4_A

>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.35  E-value=3.4e-06  Score=56.95  Aligned_cols=92  Identities=16%  Similarity=0.202  Sum_probs=68.5

Q ss_pred             CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf             99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r   55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV  134 (201)
Q Consensus        55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l  134 (201)
                      .+|+++|.|+.+||+ .|....+.+.++.+++.   .++.++.|.+|-.   +                         .+
T Consensus        23 s~kpvlV~F~a~wC~-~C~~~~p~~~~la~~~~---~~v~~~~Vd~d~~---~-------------------------~l   70 (140)
T 3hz4_A           23 SKKPVVVMFYSPACP-YCKAMEPYFEEYAKEYG---SSAVFGRINIATN---P-------------------------WT   70 (140)
T ss_dssp             CSSCEEEEEECTTCH-HHHHHHHHHHHHHHHHT---TTSEEEEEETTTC---H-------------------------HH
T ss_pred             CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHC---CCCHHHHHHHHHH---H-------------------------HH
T ss_conf             999099999899998-99988499999877614---7420244431546---9-------------------------99


Q ss_pred             HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf             886090886225655677775258742069998589829998578988899999999998514
Q gi|254780281|r  135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYG  197 (201)
Q Consensus       135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~  197 (201)
                      ++.|+|..                  .++++++ ++|+.+..+.+..+++.+.+.|+.+++.+
T Consensus        71 ~~~~~V~~------------------~PT~~~~-~~G~~v~~~~G~~~~~~l~~~i~~~l~~~  114 (140)
T 3hz4_A           71 AEKYGVQG------------------TPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDMLQHG  114 (140)
T ss_dssp             HHHHTCCE------------------ESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred             HHHCCCEE------------------ECEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf             99839947------------------5969999-89999999979999999999999998524