HHsearch results for GI: 254780281 and protein with PDBid: 3hz4_A
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.35 E-value=3.4e-06 Score=56.95 Aligned_cols=92 Identities=16% Similarity=0.202 Sum_probs=68.5
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHH
Q ss_conf 99679999604777654468888776555430244333058876514333330577777531368642245898898988
Q gi|254780281|r 55 YIKPSIVFFGFTNCSAVCPTTLSRLDRLLKQVDPTGTLLNAYFITVDPKRDTPEVMKKFVQRFSDRIIGISGDPIDVMRV 134 (201)
Q Consensus 55 ~Gk~~li~F~~T~Cpd~Cp~~l~~l~~~~~~l~~~~~~v~~v~IsvDP~rDt~e~l~~y~~~~~~~~~~ltg~~~~i~~l 134 (201)
.+|+++|.|+.+||+ .|....+.+.++.+++. .++.++.|.+|-. + .+
T Consensus 23 s~kpvlV~F~a~wC~-~C~~~~p~~~~la~~~~---~~v~~~~Vd~d~~---~-------------------------~l 70 (140)
T 3hz4_A 23 SKKPVVVMFYSPACP-YCKAMEPYFEEYAKEYG---SSAVFGRINIATN---P-------------------------WT 70 (140)
T ss_dssp CSSCEEEEEECTTCH-HHHHHHHHHHHHHHHHT---TTSEEEEEETTTC---H-------------------------HH
T ss_pred CCCEEEEEEECCCCH-HHHHHHHHHHHHHHHHC---CCCHHHHHHHHHH---H-------------------------HH
T ss_conf 999099999899998-99988499999877614---7420244431546---9-------------------------99
Q ss_pred HHHCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 886090886225655677775258742069998589829998578988899999999998514
Q gi|254780281|r 135 AKNFRIYVNNVLAEKSGVEEKYFVDHTTALLLFDTAGSIVGVIPYKDDSDSAIEKINRLITYG 197 (201)
Q Consensus 135 ~~~~~v~~~~~~~~~~~~~~~y~i~H~~~~~lid~~G~i~~~~~~~~~~~~i~~~i~~ll~~~ 197 (201)
++.|+|.. .++++++ ++|+.+..+.+..+++.+.+.|+.+++.+
T Consensus 71 ~~~~~V~~------------------~PT~~~~-~~G~~v~~~~G~~~~~~l~~~i~~~l~~~ 114 (140)
T 3hz4_A 71 AEKYGVQG------------------TPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDMLQHG 114 (140)
T ss_dssp HHHHTCCE------------------ESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHCCCEE------------------ECEEEEE-ECCEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 99839947------------------5969999-89999999979999999999999998524