HHsearch alignment for GI: 254780282 and conserved domain: PRK03573
>PRK03573 transcriptional regulator SlyA; Provisional.
Probab=96.78 E-value=0.0023 Score=38.85 Aligned_cols=76 Identities=20% Similarity=0.245 Sum_probs=59.7
Q ss_pred CCCHHHHHHHHHHHHHC---CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECC-------CCEEEEECCCCCCCCCC
Q ss_conf 88889999999999827---689999882899789999999999995882179769-------94685001343322222
Q gi|254780282|r 2 SFDWDKLRVFYVVARSG---SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHA-------RGLTLTEQGSKLHRVTS 71 (299)
Q Consensus 2 ~md~~~L~~f~~v~~~g---s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~-------~~~~lT~~G~~l~~~a~ 71 (299)
T Consensus 28 gLt~~q~~~L~~L~~~~~g~tq~eLa~~l~v~~~t~tr~ld~LE~~---GlI~R~~~~~DrR~~~i~LT~~G~~l~~~~~ 104 (144)
T PRK03573 28 ELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEEK---GLISRQTCASDRRAKRIKLTEKAEPLISEME 104 (144)
T ss_pred CCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC---CCEEEECCCCCCCEEEEEECHHHHHHHHHHH
T ss_conf 9982599999999973989899999999798783699999999988---8978622867675467678887999999999
Q ss_pred CCCCCCCHH
Q ss_conf 222221012
Q gi|254780282|r 72 EVYHKLETT 80 (299)
Q Consensus 72 ~~l~~~~~~ 80 (299)
T Consensus 105 ~~~~~~~~~ 113 (144)
T PRK03573 105 AVINKTRAE 113 (144)
T ss_pred HHHHHHHHH
T ss_conf 999999999