HHsearch alignment for GI: 254780282 and conserved domain: PRK03573

>PRK03573 transcriptional regulator SlyA; Provisional.
Probab=96.78  E-value=0.0023  Score=38.85  Aligned_cols=76  Identities=20%  Similarity=0.245  Sum_probs=59.7

Q ss_pred             CCCHHHHHHHHHHHHHC---CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECC-------CCEEEEECCCCCCCCCC
Q ss_conf             88889999999999827---689999882899789999999999995882179769-------94685001343322222
Q gi|254780282|r    2 SFDWDKLRVFYVVARSG---SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHA-------RGLTLTEQGSKLHRVTS   71 (299)
Q Consensus         2 ~md~~~L~~f~~v~~~g---s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~-------~~~~lT~~G~~l~~~a~   71 (299)
T Consensus        28 gLt~~q~~~L~~L~~~~~g~tq~eLa~~l~v~~~t~tr~ld~LE~~---GlI~R~~~~~DrR~~~i~LT~~G~~l~~~~~  104 (144)
T PRK03573         28 ELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEEK---GLISRQTCASDRRAKRIKLTEKAEPLISEME  104 (144)
T ss_pred             CCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC---CCEEEECCCCCCCEEEEEECHHHHHHHHHHH
T ss_conf             9982599999999973989899999999798783699999999988---8978622867675467678887999999999


Q ss_pred             CCCCCCCHH
Q ss_conf             222221012
Q gi|254780282|r   72 EVYHKLETT   80 (299)
Q Consensus        72 ~~l~~~~~~   80 (299)
T Consensus       105 ~~~~~~~~~  113 (144)
T PRK03573        105 AVINKTRAE  113 (144)
T ss_pred             HHHHHHHHH
T ss_conf             999999999