HHsearch alignment for GI: 254780282 and conserved domain: PRK09495
>PRK09495 glnH glutamine ABC transporter periplasmic protein; Reviewed.
Probab=91.28 E-value=1 Score=23.45 Aligned_cols=170 Identities=10% Similarity=0.028 Sum_probs=82.9
Q ss_pred CCCCCCCCCCCCCCCC----------CCCHHHHHHHHHHCCCCCCCCCC---CCCCCCCCCCCCCCC-CCC-CCCCCCC-
Q ss_conf 2223332111000000----------00013566754200012222222---222222222222234-565-4321111-
Q gi|254780282|r 92 SGKLRIATTIDLGQNL----------LQGNLKEFLLLYPDIQIQLILDN---KDIDISMDYADCAIR-LRK-PIQSSSL- 155 (299)
Q Consensus 92 ~g~i~I~~~~~~~~~~----------l~~~l~~f~~~~P~i~i~i~~~~---~~~~l~~~~~Di~i~-~~~-~~~~~~l- 155 (299)
T Consensus 24 ~~~l~Vg~~~~~pPf~f~~~g~~~GfdvDl~~~ia~~l-g~~~e~~~~~~~~~i~~l~~g~~D~~~~~~~~T~eR~~~~~ 102 (247)
T PRK09495 24 DKELVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKEL-KLDYTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAID 102 (247)
T ss_pred CCEEEEEECCCCCCEEECCCCEEEEEHHHHHHHHHHHH-CCCEEEEECCHHHHHHHHHCCCCCEEECCCCCCHHHHHHCC
T ss_conf 99499998998798057679927882999999999996-99469997788999999976995636466014789984333
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHH
Q ss_conf 22345554332112344321112222221100011235664332110002356652022343212114532420013567
Q gi|254780282|r 156 IQRKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYC 235 (299)
Q Consensus 156 ~~~~l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v 235 (299)
T Consensus 103 FS~py~~~~~~i~v~~~~----~~i~~~~dL~Gk~v-~v~~Gs~----~~~~~~~~-----~~~~~i~~~~~~~~~~~aL 168 (247)
T PRK09495 103 FSDGYYKSGLLVMVKANN----NDIKSVKDLDGKVV-AVKSGTG----SVDYAKAN-----IKTKDLRQFPNIDNAYLEL 168 (247)
T ss_pred CCCCCEEEEEEEEEECCC----CCCCCHHHCCCCEE-EEECCCH----HHHHHHHH-----CCCCCEEECCCHHHHHHHH
T ss_conf 477707724699998999----77798245489889-9846958----99999963-----8898669659889999987
Q ss_pred HHHCCEEEEEHH-----HHCCC--CCEEEECCCCCCCCCEEEEEECCCCC
Q ss_conf 873842331177-----76019--98466177666766008999348778
Q gi|254780282|r 236 VLGSGIALLPDY-----IVKDN--PNLVRIMEDVITPSFTVYFCYPEALK 278 (299)
Q Consensus 236 ~~g~Gia~lp~~-----~~~~~--~~lv~i~~~~~~~~~~~~lv~~~~~~ 278 (299)
T Consensus 169 ~~GrvDa~v~d~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~ia~~k~~~ 216 (247)
T PRK09495 169 GTGRADAVLHDTPNILYFIKTAGNGQF-KAVGD-SLEAQQYGIAFPKGSD 216 (247)
T ss_pred HCCCEEEEEECHHHHHHHHHHCCCCCE-EEECC-CCCCCEEEEEEECCHH
T ss_conf 658734999568999999984899978-99467-7776459999928829