HHsearch alignment for GI: 254780282 and conserved domain: PRK12682
>PRK12682 transcriptional regulator CysB-like protein; Reviewed.
Probab=100.00 E-value=0 Score=385.58 Aligned_cols=289 Identities=21% Similarity=0.233 Sum_probs=253.0
Q ss_pred CCHHHHHHHHHHHHHC-CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCE-EEEECCCCCCCCCCCCCCCCCHH
Q ss_conf 8889999999999827-689999882899789999999999995882179769946-85001343322222222221012
Q gi|254780282|r 3 FDWDKLRVFYVVARSG-SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGL-TLTEQGSKLHRVTSEVYHKLETT 80 (299)
Q Consensus 3 md~~~L~~f~~v~~~g-s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~-~lT~~G~~l~~~a~~~l~~~~~~ 80 (299)
T Consensus 1 M~l~~L~~f~~vv~~~~Sft~AA~~L~isQ~avS~~I~~LE~~Lg~~Lf~R~~~r~~~LT~~G~~l~~~a~~il~~~~~~ 80 (309)
T PRK12682 1 MNLQQLRFVREAVRRNLNLTEAAKALHTSQPGVSKAIIELEEELGIEIFERHGKRLKGLTEPGKAVLDVIERILREVGNI 80 (309)
T ss_pred CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 94799999999998699999999997898789999999999985998899889998570188999999999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC--C-CCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 210012232222223332111000000000135667542000122222222--2-2222222222234565432111122
Q gi|254780282|r 81 QIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNK--D-IDISMDYADCAIRLRKPIQSSSLIQ 157 (299)
Q Consensus 81 ~~~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~--~-~~l~~~~~Di~i~~~~~~~~~~l~~ 157 (299)
T Consensus 81 ~~~~~~~~~~~~G~lrIg~~~~~~~~~lp~~l~~f~~~~P~v~l~l~~~~~~~~~~~l~~g~~Dl~i~~~~~~~~~~l~~ 160 (309)
T PRK12682 81 KRIGDEFSNQDSGTLTIATTHTQARYVLPRVVAKFRKRYPKVNLSLHQGSPDEIAQMVISGEADIGIATESLDDDPDLVT 160 (309)
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHCCCCCCCCEEE
T ss_conf 99998752567774121243133320386253999987898379998378299999997699764565077778988089
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHH
Q ss_conf 34555433211234432111222222110001123566433211000235665202234321211453242001356787
Q gi|254780282|r 158 RKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVL 237 (299)
Q Consensus 158 ~~l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~ 237 (299)
T Consensus 161 ~~l~~~~~~~v~~~~h~la~~~~i~~~dL~~~p~I~~~~~~~~r~~~~~~~----~~~g~~p~~~~~~~~~~~~~~~v~~ 236 (309)
T PRK12682 161 LPCYDWTHAVIVPSDHPLAQKERITLEDLAEYPLITYHPGFTGRSAIDKAF----AAAGLQPDIVLEAIDSDVIKTYVRL 236 (309)
T ss_pred EEEECCCEEEEECCCCHHHCCCCCCHHHHCCCCEEEECCCCCHHHHHHHHH----HHCCCCCCEEEEECCHHHHHHHHHH
T ss_conf 993315236761699721149999999982899797279986799999999----9779996269999989999999995
Q ss_pred HCCEEEEEHHHHCC--CCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 38423311777601--99846617766676600899934877888899999999999985
Q gi|254780282|r 238 GSGIALLPDYIVKD--NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKAR 295 (299)
Q Consensus 238 g~Gia~lp~~~~~~--~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r 295 (299)
T Consensus 237 G~Gi~~lp~~~~~~~~~~~Lv~v~~~~~~~~~~~~l~~rk~~~l~~~~~~FId~l~e~l~ 296 (309)
T PRK12682 237 GLGVGIIAEMAYRPDRDGDLVALPAGHLFGPNTAWVAVKRGAYLRNYVYDFIELLAPHLS 296 (309)
T ss_pred CCEEEHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 994242289983376479989997988777617999996966118999999999998729