HHsearch alignment for GI: 254780282 and conserved domain: PRK12682

>PRK12682 transcriptional regulator CysB-like protein; Reviewed.
Probab=100.00  E-value=0  Score=385.58  Aligned_cols=289  Identities=21%  Similarity=0.233  Sum_probs=253.0

Q ss_pred             CCHHHHHHHHHHHHHC-CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCE-EEEECCCCCCCCCCCCCCCCCHH
Q ss_conf             8889999999999827-689999882899789999999999995882179769946-85001343322222222221012
Q gi|254780282|r    3 FDWDKLRVFYVVARSG-SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGL-TLTEQGSKLHRVTSEVYHKLETT   80 (299)
Q Consensus         3 md~~~L~~f~~v~~~g-s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~-~lT~~G~~l~~~a~~~l~~~~~~   80 (299)
T Consensus         1 M~l~~L~~f~~vv~~~~Sft~AA~~L~isQ~avS~~I~~LE~~Lg~~Lf~R~~~r~~~LT~~G~~l~~~a~~il~~~~~~   80 (309)
T PRK12682          1 MNLQQLRFVREAVRRNLNLTEAAKALHTSQPGVSKAIIELEEELGIEIFERHGKRLKGLTEPGKAVLDVIERILREVGNI   80 (309)
T ss_pred             CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             94799999999998699999999997898789999999999985998899889998570188999999999999999999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC--C-CCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             210012232222223332111000000000135667542000122222222--2-2222222222234565432111122
Q gi|254780282|r   81 QIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNK--D-IDISMDYADCAIRLRKPIQSSSLIQ  157 (299)
Q Consensus        81 ~~~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~--~-~~l~~~~~Di~i~~~~~~~~~~l~~  157 (299)
T Consensus        81 ~~~~~~~~~~~~G~lrIg~~~~~~~~~lp~~l~~f~~~~P~v~l~l~~~~~~~~~~~l~~g~~Dl~i~~~~~~~~~~l~~  160 (309)
T PRK12682         81 KRIGDEFSNQDSGTLTIATTHTQARYVLPRVVAKFRKRYPKVNLSLHQGSPDEIAQMVISGEADIGIATESLDDDPDLVT  160 (309)
T ss_pred             HHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHCCCCCCCCEEE
T ss_conf             99998752567774121243133320386253999987898379998378299999997699764565077778988089


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHH
Q ss_conf             34555433211234432111222222110001123566433211000235665202234321211453242001356787
Q gi|254780282|r  158 RKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVL  237 (299)
Q Consensus       158 ~~l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~  237 (299)
T Consensus       161 ~~l~~~~~~~v~~~~h~la~~~~i~~~dL~~~p~I~~~~~~~~r~~~~~~~----~~~g~~p~~~~~~~~~~~~~~~v~~  236 (309)
T PRK12682        161 LPCYDWTHAVIVPSDHPLAQKERITLEDLAEYPLITYHPGFTGRSAIDKAF----AAAGLQPDIVLEAIDSDVIKTYVRL  236 (309)
T ss_pred             EEEECCCEEEEECCCCHHHCCCCCCHHHHCCCCEEEECCCCCHHHHHHHHH----HHCCCCCCEEEEECCHHHHHHHHHH
T ss_conf             993315236761699721149999999982899797279986799999999----9779996269999989999999995


Q ss_pred             HCCEEEEEHHHHCC--CCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             38423311777601--99846617766676600899934877888899999999999985
Q gi|254780282|r  238 GSGIALLPDYIVKD--NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKAR  295 (299)
Q Consensus       238 g~Gia~lp~~~~~~--~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r  295 (299)
T Consensus       237 G~Gi~~lp~~~~~~~~~~~Lv~v~~~~~~~~~~~~l~~rk~~~l~~~~~~FId~l~e~l~  296 (309)
T PRK12682        237 GLGVGIIAEMAYRPDRDGDLVALPAGHLFGPNTAWVAVKRGAYLRNYVYDFIELLAPHLS  296 (309)
T ss_pred             CCEEEHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf             994242289983376479989997988777617999996966118999999999998729