HHsearch alignment for GI: 254780282 and conserved domain: PRK12683
>PRK12683 transcriptional regulator CysB-like protein; Reviewed.
Probab=100.00 E-value=0 Score=384.83 Aligned_cols=290 Identities=20% Similarity=0.248 Sum_probs=251.4
Q ss_pred CCHHHHHHHHHHHHHC-CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEE-EEECCCCCCCCCCCCCCCCCHH
Q ss_conf 8889999999999827-6899998828997899999999999958821797699468-5001343322222222221012
Q gi|254780282|r 3 FDWDKLRVFYVVARSG-SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLT-LTEQGSKLHRVTSEVYHKLETT 80 (299)
Q Consensus 3 md~~~L~~f~~v~~~g-s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~-lT~~G~~l~~~a~~~l~~~~~~ 80 (299)
T Consensus 1 M~lrqL~~F~~~v~~~~s~t~AA~~L~iSQpavS~~Ik~LE~eLG~~LF~R~~~r~~~LT~~G~~l~~~a~~il~~~~~~ 80 (308)
T PRK12683 1 MNFQQLRIIREAVRQNFNLTEVANALYTSQSGVSKQIKDLEDELGVEIFIRRGKRLTGLTEPGKELLQIVERMLLDAENL 80 (308)
T ss_pred CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 96799999999998689999999997897779999999999996997389869987557876999999999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 210012232222223332111000000000135667542000122222222---22222222222234565432111122
Q gi|254780282|r 81 QIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNK---DIDISMDYADCAIRLRKPIQSSSLIQ 157 (299)
Q Consensus 81 ~~~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~---~~~l~~~~~Di~i~~~~~~~~~~l~~ 157 (299)
T Consensus 81 ~~~~~~~~~~~~G~l~Ig~~~~~~~~~lp~~l~~f~~~~P~v~i~l~~~~~~~~~~~L~~g~~Dl~i~~~~~~~~~~l~~ 160 (308)
T PRK12683 81 RRLARQFADRDSGRLTVATTHTQARYALPKVVRQFTEVFPKVHLALRQGSPQEIAEMLLNGEADIGIATEALDREPDLVS 160 (308)
T ss_pred HHHHHHHHCCCCCEEEECCCCHHHHHCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEECCCCCCCCCCCEE
T ss_conf 99998752677762420013201120168466899987899669996078699999997799778806667788877168
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHH
Q ss_conf 34555433211234432111222222110001123566433211000235665202234321211453242001356787
Q gi|254780282|r 158 RKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVL 237 (299)
Q Consensus 158 ~~l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~ 237 (299)
T Consensus 161 ~~l~~~~~~lv~~~~hpla~~~~v~l~dl~~~p~I~~~~~~~~r~~i~~~~----~~~g~~p~~~~e~~~~~~i~~~V~~ 236 (308)
T PRK12683 161 FPYYSWHHVVVVPKGHPLTGRENLTLEALAEYPIITYDQGFTGRSHIDQAF----AEAGAVPDIVLTALDADVIKTYVEL 236 (308)
T ss_pred EEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHH----HHCCCCCCEEEEECCHHHHHHHHHH
T ss_conf 761245158984699953369999999985999896189982999999999----9779998579999989999999997
Q ss_pred HCCEEEEEHHHHCC--CCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 38423311777601--998466177666766008999348778888999999999999850
Q gi|254780282|r 238 GSGIALLPDYIVKD--NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARD 296 (299)
Q Consensus 238 g~Gia~lp~~~~~~--~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r~ 296 (299)
T Consensus 237 g~Gi~ilp~~~~~~~~~~~lv~l~~~~~~~~~~~~i~~rk~~~Ls~~a~~Fie~l~~~l~~ 297 (308)
T PRK12683 237 GMGVGIVAAMAYDPQRDTGLVALDTQHLFEANTTRVALRRGAYLRGYAYRFIEMFAPHLSE 297 (308)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCH
T ss_conf 9847078999987886099799989788766179999909685799999999998886298