HHsearch alignment for GI: 254780282 and conserved domain: PRK12683

>PRK12683 transcriptional regulator CysB-like protein; Reviewed.
Probab=100.00  E-value=0  Score=384.83  Aligned_cols=290  Identities=20%  Similarity=0.248  Sum_probs=251.4

Q ss_pred             CCHHHHHHHHHHHHHC-CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEE-EEECCCCCCCCCCCCCCCCCHH
Q ss_conf             8889999999999827-6899998828997899999999999958821797699468-5001343322222222221012
Q gi|254780282|r    3 FDWDKLRVFYVVARSG-SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLT-LTEQGSKLHRVTSEVYHKLETT   80 (299)
Q Consensus         3 md~~~L~~f~~v~~~g-s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~-lT~~G~~l~~~a~~~l~~~~~~   80 (299)
T Consensus         1 M~lrqL~~F~~~v~~~~s~t~AA~~L~iSQpavS~~Ik~LE~eLG~~LF~R~~~r~~~LT~~G~~l~~~a~~il~~~~~~   80 (308)
T PRK12683          1 MNFQQLRIIREAVRQNFNLTEVANALYTSQSGVSKQIKDLEDELGVEIFIRRGKRLTGLTEPGKELLQIVERMLLDAENL   80 (308)
T ss_pred             CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             96799999999998689999999997897779999999999996997389869987557876999999999999999999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             210012232222223332111000000000135667542000122222222---22222222222234565432111122
Q gi|254780282|r   81 QIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNK---DIDISMDYADCAIRLRKPIQSSSLIQ  157 (299)
Q Consensus        81 ~~~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~---~~~l~~~~~Di~i~~~~~~~~~~l~~  157 (299)
T Consensus        81 ~~~~~~~~~~~~G~l~Ig~~~~~~~~~lp~~l~~f~~~~P~v~i~l~~~~~~~~~~~L~~g~~Dl~i~~~~~~~~~~l~~  160 (308)
T PRK12683         81 RRLARQFADRDSGRLTVATTHTQARYALPKVVRQFTEVFPKVHLALRQGSPQEIAEMLLNGEADIGIATEALDREPDLVS  160 (308)
T ss_pred             HHHHHHHHCCCCCEEEECCCCHHHHHCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEECCCCCCCCCCCEE
T ss_conf             99998752677762420013201120168466899987899669996078699999997799778806667788877168


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHH
Q ss_conf             34555433211234432111222222110001123566433211000235665202234321211453242001356787
Q gi|254780282|r  158 RKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVL  237 (299)
Q Consensus       158 ~~l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~  237 (299)
T Consensus       161 ~~l~~~~~~lv~~~~hpla~~~~v~l~dl~~~p~I~~~~~~~~r~~i~~~~----~~~g~~p~~~~e~~~~~~i~~~V~~  236 (308)
T PRK12683        161 FPYYSWHHVVVVPKGHPLTGRENLTLEALAEYPIITYDQGFTGRSHIDQAF----AEAGAVPDIVLTALDADVIKTYVEL  236 (308)
T ss_pred             EEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHH----HHCCCCCCEEEEECCHHHHHHHHHH
T ss_conf             761245158984699953369999999985999896189982999999999----9779998579999989999999997


Q ss_pred             HCCEEEEEHHHHCC--CCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             38423311777601--998466177666766008999348778888999999999999850
Q gi|254780282|r  238 GSGIALLPDYIVKD--NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARD  296 (299)
Q Consensus       238 g~Gia~lp~~~~~~--~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r~  296 (299)
T Consensus       237 g~Gi~ilp~~~~~~~~~~~lv~l~~~~~~~~~~~~i~~rk~~~Ls~~a~~Fie~l~~~l~~  297 (308)
T PRK12683        237 GMGVGIVAAMAYDPQRDTGLVALDTQHLFEANTTRVALRRGAYLRGYAYRFIEMFAPHLSE  297 (308)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCH
T ss_conf             9847078999987886099799989788766179999909685799999999998886298