HHsearch alignment for GI: 254780282 and conserved domain: pfam00126

>pfam00126 HTH_1 Bacterial regulatory helix-turn-helix protein, lysR family.
Probab=99.78  E-value=4.3e-19  Score=129.98  Aligned_cols=60  Identities=57%  Similarity=0.801  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCC
Q ss_conf             899999999998276899998828997899999999999958821797699468500134
Q gi|254780282|r    5 WDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLTEQGS   64 (299)
Q Consensus         5 ~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~lT~~G~   64 (299)
T Consensus         1 l~~l~~f~~v~~~gs~~~AA~~l~isqs~vs~~i~~LE~~lg~~Lf~R~~~~~~lT~~G~   60 (60)
T pfam00126         1 LRQLRVFVAVAEEGSFTAAAERLGLSQPAVSRQIKRLEEELGVPLFERTTRGLRLTPAGE   60 (60)
T ss_pred             CHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCC
T ss_conf             977999999998099999999979898899999999999959970788899742893749