HHsearch alignment for GI: 254780282 and conserved domain: pfam00126
>pfam00126 HTH_1 Bacterial regulatory helix-turn-helix protein, lysR family.
Probab=99.78 E-value=4.3e-19 Score=129.98 Aligned_cols=60 Identities=57% Similarity=0.801 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCC
Q ss_conf 899999999998276899998828997899999999999958821797699468500134
Q gi|254780282|r 5 WDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLTEQGS 64 (299)
Q Consensus 5 ~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~lT~~G~ 64 (299)
T Consensus 1 l~~l~~f~~v~~~gs~~~AA~~l~isqs~vs~~i~~LE~~lg~~Lf~R~~~~~~lT~~G~ 60 (60)
T pfam00126 1 LRQLRVFVAVAEEGSFTAAAERLGLSQPAVSRQIKRLEEELGVPLFERTTRGLRLTPAGE 60 (60)
T ss_pred CHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCC
T ss_conf 977999999998099999999979898899999999999959970788899742893749