HHsearch alignment for GI: 254780282 and conserved domain: pfam01325

>pfam01325 Fe_dep_repress Iron dependent repressor, N-terminal DNA binding domain. This family includes the Diphtheria toxin repressor. DNA binding is through a helix-turn-helix motif.

Probab=94.39  E-value=0.092  Score=29.57  Aligned_cols=39  Identities=28%  Similarity=0.452  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHHCC---HHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             99999999998276---8999988289978999999999999
Q gi|254780282|r    6 DKLRVFYVVARSGS---FTHAAEQLHLSQSSISRQISGLETE   44 (299)
Q Consensus         6 ~~L~~f~~v~~~gs---~s~AA~~L~itq~avS~~i~~LE~~   44 (299)
T Consensus         6 dYLk~Iy~l~~~~~~v~~~~iA~~L~Vs~~SVt~mlkkL~~~   47 (58)
T pfam01325         6 DYLETIYTLSEEKGVVKTKDLAERLNVSPSTVSEMLKKLEKD   47 (58)
T ss_pred             HHHHHHHHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHC
T ss_conf             999999998826996129999999599925299999999988