HHsearch alignment for GI: 254780282 and conserved domain: smart00421

>smart00421 HTH_LUXR helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon

Probab=92.36  E-value=0.56  Score=25.03  Aligned_cols=46  Identities=17%  Similarity=0.322  Sum_probs=42.5

Q ss_pred             CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCE
Q ss_conf             8889999999999827689999882899789999999999995882
Q gi|254780282|r    3 FDWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIK   48 (299)
Q Consensus         3 md~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~   48 (299)
T Consensus         4 LT~rE~~il~~l~~G~s~~eIA~~L~is~~TV~~~~~~i~~Kl~v~   49 (58)
T smart00421        4 LTPREREVLRLLAEGLTNKEIAERLGISEKTVKTHLSNIMRKLGVR   49 (58)
T ss_pred             CCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf             1899999999998179999999898978989999999999984899