HHsearch results for GI: 254780282 and protein with PDBid: 1amf_A
>1amf_A Molybdate transport protein MODA; periplasmic, binding protein; 1.75A {Escherichia coli} SCOP: c.94.1.1 PDB: 1wod_A
Probab=94.88 E-value=0.035 Score=30.75 Aligned_cols=198 Identities=10% Similarity=0.036 Sum_probs=80.8
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC---CCCCCCCC-CCCCCCCCCCCCCCCCCCCCCC------
Q ss_conf 2223332111000000000135667542000122222222---22222222-2222345654321111223455------
Q gi|254780282|r 92 SGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNK---DIDISMDY-ADCAIRLRKPIQSSSLIQRKLV------ 161 (299)
Q Consensus 92 ~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~---~~~l~~~~-~Di~i~~~~~~~~~~l~~~~l~------ 161 (299)
.|+|+|.+..++ ...+.+++..|.+ +++++|++..... ...+..|. .|+.+....+..........+.
T Consensus 2 ~g~l~v~~a~s~-~~~~~~l~~~Fek-~~gi~V~~~~g~s~~l~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (233)
T 1amf_A 2 EGKITVFAAASL-TNAMQDIATQFKK-EKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQT 79 (233)
T ss_dssp -CEEEEEEEGGG-HHHHHHHHHHHHH-HHCCEEEEEEECHHHHHHHHHHTCCCSEEECSSHHHHHHHHHTTCBCGGGCEE
T ss_pred CCEEEEEEECCH-HHHHHHHHHHHHH-HHCCEEEEEECCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCCEEE
T ss_conf 977999996263-9999999999988-11977999977759999999739998689966455567777525656664245
Q ss_pred --CCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHH
Q ss_conf --5433211234432111222---22211000112356--6433211000235665202234321211453242001356
Q gi|254780282|r 162 --TIHMHAYAAPHYLKNCREP---LSIQELDKHNLITF--GDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQY 234 (299)
Q Consensus 162 --~~~~~~v~~~~~~~~~~~~---~~~~dL~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 234 (299)
......+...........+ .++.++..-..+.. ....+.......++...+........ .....+.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 158 (233)
T 1amf_A 80 LLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPK-LAPAEDVRGALAL 158 (233)
T ss_dssp EEEECEEEEEETTCCCCCCCCSTTCCHHHHHTTCCEEEECTTTCHHHHHHHHHHHHTTCHHHHGGG-EEEESSHHHHHHH
T ss_pred ECCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHCCC-CCCCCCHHHHHHH
T ss_conf 204412553034211454455425569862469938998998751899999999972751232301-0225550477888
Q ss_pred HHHHCC-EEEEEHHHHC-CCC-CEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 787384-2331177760-199-8466177666766008999348778888999999999999
Q gi|254780282|r 235 CVLGSG-IALLPDYIVK-DNP-NLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLK 293 (299)
Q Consensus 235 v~~g~G-ia~lp~~~~~-~~~-~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~ 293 (299)
+..|.+ +++.....+. ..+ ...-+.|........+.+...++.+ ++.+++|+|||++.
T Consensus 159 ~~~g~~~~~~~~~s~~~~~~~~~~~~~~p~~~~~~~~~~~~i~k~~~-~~~A~~FidfllS~ 219 (233)
T 1amf_A 159 VERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHN-NATVKAFYDYLKGP 219 (233)
T ss_dssp HHTTSSSEEEEEHHHHHHCSSEEEEEECCGGGSCCEEEEEEEBTTCC-SHHHHHHHHHHTSH
T ss_pred HHHCCCCEEEHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEECCCC-CHHHHHHHHHHCCH
T ss_conf 76246628744678898730457539857988637678899987999-99999999997899