HHsearch results for GI: 254780282 and protein with PDBid: 1r1t_A

>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A
Probab=97.07  E-value=0.0007  Score=40.60  Aligned_cols=56  Identities=21%  Similarity=0.340  Sum_probs=42.7

Q ss_pred             CHHHHHHHHHHHH-HCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEE
Q ss_conf             8899999999998-27689999882899789999999999995882179769946850
Q gi|254780282|r    4 DWDKLRVFYVVAR-SGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLT   60 (299)
Q Consensus         4 d~~~L~~f~~v~~-~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~lT   60 (299)
                      |-..|+.+..+++ ..+++.-|+.+++|||+||+|++.|++. |.--..|.|+.+.-+
T Consensus        45 dp~Rl~Il~~L~~~~~~v~ela~~l~~s~stvS~HL~~L~~a-GlV~~~r~Gr~~~Y~  101 (122)
T 1r1t_A           45 DPNRLRLLSLLARSELCVGDLAQAIGVSESAVSHQLRSLRNL-RLVSYRKQGRHVYYQ  101 (122)
T ss_dssp             CHHHHHHHHHHTTCCBCHHHHHHHHTCCHHHHHHHHHHHHHT-TSEEEEEETTEEEEE
T ss_pred             CHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC-CEEEEEEECCEEEEE
T ss_conf             999999999998299769999999891988899999999988-933689873789999