HHsearch results for GI: 254780282 and protein with PDBid: 1xt8_A
>1xt8_A Putative amino-acid transporter periplasmic solute-binding protein; ABC transport, cysteine uptake, spine, structural genomics; 2.00A {Campylobacter jejuni} SCOP: c.94.1.1
Probab=94.10 E-value=0.13 Score=27.52 Aligned_cols=185 Identities=14% Similarity=0.132 Sum_probs=88.9
Q ss_pred CCCCCCCCCCCCCCCC-----------CCCCHHHHHHHH--HHCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCC--CC
Q ss_conf 2222333211100000-----------000013566754--20001222222---222222222222223456543--21
Q gi|254780282|r 91 PSGKLRIATTIDLGQN-----------LLQGNLKEFLLL--YPDIQIQLILD---NKDIDISMDYADCAIRLRKPI--QS 152 (299)
Q Consensus 91 ~~g~i~I~~~~~~~~~-----------~l~~~l~~f~~~--~P~i~i~i~~~---~~~~~l~~~~~Di~i~~~~~~--~~ 152 (299)
.+|.|+||+.+...+. +-.+++..+.++ ..++.+++... +....+..+++|+.+...... ..
T Consensus 42 ~~g~l~Vgv~~~~pP~~~~d~~G~~~G~~~Dl~~~ia~~Lg~~~~~v~~~~~~~~~~~~~l~~g~~d~~~~~~~~t~~R~ 121 (292)
T 1xt8_A 42 QNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRA 121 (292)
T ss_dssp HHSSEEEEECSEETTTEEECTTSCEESHHHHHHHHHHHHHHSCTTCEEEEECCGGGHHHHHHTTSCSEECSSCBCCHHHH
T ss_pred CCCEEEEEECCCCCCCEEECCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCHH
T ss_conf 09989999858989906999999887306899999999855897179999634786899998699771135565671121
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHH
Q ss_conf 111-2234555433211234432111222222110001123566433211000235665202234321211453242001
Q gi|254780282|r 153 SSL-IQRKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSI 231 (299)
Q Consensus 153 ~~l-~~~~l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 231 (299)
..+ ...+++.....+++.++ ....+++||.+.... ...+.. ...++.... +.....++++.+.+
T Consensus 122 ~~~~fs~py~~~~~~~~~~~~-----~~i~~~~dL~g~~V~-v~~g~~----~~~~l~~~~-----~~~~~v~~~~~~~~ 186 (292)
T 1xt8_A 122 EQVDFCSPYMKVALGVAVPKD-----SNITSVEDLKDKTLL-LNKGTT----ADAYFTQNY-----PNIKTLKYDQNTET 186 (292)
T ss_dssp TTEEECCCCEEEEEEEEEETT-----CCCCSSGGGTTSEEE-EETTSH----HHHHHHHHC-----TTSEEEEESSHHHH
T ss_pred CCCCCCCCEEECCCEEEEECC-----CCCCCHHHHHHCEEE-EECCCH----HHHHHHHHH-----HHHHHEEECCCCCH
T ss_conf 024667534741513787224-----576747777006677-515858----999999710-----00000000022201
Q ss_pred HHHHHHHCCEEEE-EHHH----HCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 3567873842331-1777----6019984661776667660089993487788889999999999998
Q gi|254780282|r 232 MQYCVLGSGIALL-PDYI----VKDNPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKA 294 (299)
Q Consensus 232 ~~~v~~g~Gia~l-p~~~----~~~~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~ 294 (299)
++++.+|..=+++ .... +++.+....... .......+++..+++ ++.....++--+++.
T Consensus 187 ~~~l~~G~vDa~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~iav~k~---~~~L~~~ln~~l~~l 250 (292)
T 1xt8_A 187 FAALMDKRGDALSHDNTLLFAWVKDHPDFKMGIK-ELGNKDVIAPAVKKG---DKELKEFIDNLIIKL 250 (292)
T ss_dssp HHHHHTTSSSEEEEEHHHHHHHHHHCTTEEEEEE-EEEEEEEECCEEETT---CHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEEECHHHHHHHHHHCCCCEEECC-CCCCCCEEEEEEECC---CHHHHHHHHHHHHHH
T ss_conf 1244369369999569999999997899789414-678773399999799---999999999999999