HHsearch results for GI: 254780282 and protein with PDBid: 2h9b_A
>2h9b_A HTH-type transcriptional regulator BENM; LTTR, transcriptional activator, LYSR-type transcriptional regulator; 1.80A {Acinetobacter SP} PDB: 2h99_A 3k1m_A 3k1n_A 3k1p_A 2f7a_A* 2f6p_A 2f78_A 2f6g_A* 2f8d_A 2f97_A*
Probab=100.00 E-value=0 Score=333.80 Aligned_cols=289 Identities=17% Similarity=0.164 Sum_probs=237.6
Q ss_pred CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHH
Q ss_conf 88899999999998276899998828997899999999999958821797699468500134332222222222101221
Q gi|254780282|r 3 FDWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLTEQGSKLHRVTSEVYHKLETTQI 82 (299)
Q Consensus 3 md~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~lT~~G~~l~~~a~~~l~~~~~~~~ 82 (299)
||+++|++|++|+++||||+||+.|||||||||++|++||++||++||+|+++|+.||++|+.|+++++.++..++++.+
T Consensus 1 M~l~~l~~f~~v~~~~s~s~AA~~L~vtq~avS~~i~~LE~~lG~~Lf~R~~~~~~lT~~G~~l~~~a~~il~~~~~~~~ 80 (312)
T 2h9b_A 1 MELRHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLERGSRPVKTTPEGHFFYQYAIKLLSNVDQMVS 80 (312)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEECHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 96799999999998099999999988888999999999999839988998899727887565203035667899999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC--C-CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 001223222222333211100000000013566754200012222222--2-2222222222223456543211112234
Q gi|254780282|r 83 ELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDN--K-DIDISMDYADCAIRLRKPIQSSSLIQRK 159 (299)
Q Consensus 83 ~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~--~-~~~l~~~~~Di~i~~~~~~~~~~l~~~~ 159 (299)
...... +..+.++||++++++..++++.+.+|.++||++++++...+ . ...+.+|++|++|.... ..++++...+
T Consensus 81 ~~~~~~-~~~~~l~i~~~~~~~~~~l~~~l~~~~~~~p~v~l~~~~~~~~~l~~~l~~g~~Dlai~~~~-~~~~~~~~~~ 158 (312)
T 2h9b_A 81 MTKRIA-SVEKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLRIELYEMGTKAQTEALKEGRIDAGFGRLK-ISDPAIKHSL 158 (312)
T ss_dssp ---------CCEEEEEECGGGGGTTHHHHHHHHHHTCTTCEEEEEECCHHHHHHHHHTTSCSEEEESSC-CCCTTEEEEE
T ss_pred HHHHHH-CCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCEEEEECC-CCCCCCEEEE
T ss_conf 998654-35745999753566899999999999997899778531355077999997699647996068-8987617998
Q ss_pred CCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHH
Q ss_conf 555433211234432111--222222110001123566433211000235665202234321211453242001356787
Q gi|254780282|r 160 LVTIHMHAYAAPHYLKNC--REPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVL 237 (299)
Q Consensus 160 l~~~~~~~v~~~~~~~~~--~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~ 237 (299)
++.++++++++++|+... +.+.+++|+.++|+|.+....... ....+.......+......++++|..+++++|.+
T Consensus 159 l~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~ 236 (312)
T 2h9b_A 159 LRNERLMVAVHASHPLNQMKDKGVHLNDLIDEKILLYPSSPKPN--FSTHVMNIFSDHGLEPTKINEVREVQLALGLVAA 236 (312)
T ss_dssp EEEEEEEEEEETTSGGGGGTTTCBCGGGSTTSEEEECCCSSSSS--HHHHHHHHHHTTTCCCSEEEECSSHHHHHHHHHT
T ss_pred ECCCEEEEEECCCCHHHHCCCCCCHHHHHCCCCEEEECCCCCCC--HHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHC
T ss_conf 11305999963788466533432025564379779842876651--2466666666507886146531679999999983
Q ss_pred HCCEEEEEHHHHCCC-CCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 384233117776019-98466177666766008999348778888999999999999850
Q gi|254780282|r 238 GSGIALLPDYIVKDN-PNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARD 296 (299)
Q Consensus 238 g~Gia~lp~~~~~~~-~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r~ 296 (299)
|.|++++|.++++.+ ++++.+....+.+.++++++|+++. .++.++.|++++.+...+
T Consensus 237 g~gi~ilP~~~~~~~~~~l~~~pl~~~~~~~~~~l~~r~~~-~~~~~~~~~~~~~~~~a~ 295 (312)
T 2h9b_A 237 GEGISLVPASTQSIQLFNLSYVPLLDPDAITPIYIAVRNME-ESTYIYSLYETIRQIYAY 295 (312)
T ss_dssp TSCBEEEEGGGGGBCCTTEEEEEBCSTTCEEEEEEEEETTC-CCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECHHHHHHHHCCEEEEECCCCCCEEEEEEEEECCC-CCHHHHHHHHHHHHHHHC
T ss_conf 99599920988745338879998579886328999997999-998999999999999717