HHsearch results for GI: 254780282 and protein with PDBid: 2hxw_A
>2hxw_A Major antigenic peptide PEB3; periplasmic binding protein, N-glycosylation, structural genomics; HET: FLC; 1.60A {Campylobacter jejuni} PDB: 3fjm_A 3fjg_A 3fir_A* 3fj7_A*
Probab=95.32 E-value=0.017 Score=32.57 Aligned_cols=194 Identities=8% Similarity=-0.052 Sum_probs=85.3
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCC---C-------CCCCCCCCC
Q ss_conf 3332111000000000135667542000122222222--222222222222345654321---1-------112234555
Q gi|254780282|r 95 LRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNK--DIDISMDYADCAIRLRKPIQS---S-------SLIQRKLVT 162 (299)
Q Consensus 95 i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~--~~~l~~~~~Di~i~~~~~~~~---~-------~l~~~~l~~ 162 (299)
|+|....+... .+-++...|.+ .++++|++..... .......+.|+.+........ . .-....++.
T Consensus 3 i~v~~~~~~~~-~~~~l~~~Fek-~tGi~V~~~~~~s~~l~~~i~~~aDv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (237)
T 2hxw_A 3 VNLYGPGGPHT-ALKDIANKYSE-KTGVKVNVNFGPQATWFEKAKKDADILFGASDQSALAIASDFGKDFNVSKIKPLYF 80 (237)
T ss_dssp EEEEECSSTHH-HHHHHHHHHHH-HHCCCEEEEESSHHHHHHHHHHHCSEEEESSHHHHHHHHTTSGGGCCGGGCEEEEE
T ss_pred EEEEECCCCHH-HHHHHHHHHHH-HHCCEEEEEECCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf 99994789789-99999999988-01975999977829999997659999998460478999886104677772799994
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--C-CCCCCCCCHHHHHHHHCCCCCC------CCCCEEEECCCCHHHH
Q ss_conf 43321123443211122222211000112356--6-4332110002356652022343------2121145324200135
Q gi|254780282|r 163 IHMHAYAAPHYLKNCREPLSIQELDKHNLITF--G-DLIPKCMEDFNWLATVDRPIGE------PRISCLQVNSYLSIMQ 233 (299)
Q Consensus 163 ~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~--~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~s~~~~~~ 233 (299)
..++++..++.+. .+.+++||.+..+-.. . ...+.......+.......... ........++...+..
T Consensus 81 ~~~vl~~~~~~~~---~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (237)
T 2hxw_A 81 REAIILTQKGNPL---KIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNFRNNIVAFVPNSGSARK 157 (237)
T ss_dssp EEEEEEESTTCTT---CCCSHHHHHHSCCCEEECCCTTSSCCTTTTHHHHHHHTTCCHHHHHHHHHTEEEECCCCTTC--
T ss_pred EEEEEEEECCCCC---CCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCHHHHHH
T ss_conf 3299999799976---7652356642031066513688732227999999862222088999743570586588899999
Q ss_pred HHHHHC-CEEEEEHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 678738-423311777601998466177666766008999348778888999999999999
Q gi|254780282|r 234 YCVLGS-GIALLPDYIVKDNPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLK 293 (299)
Q Consensus 234 ~v~~g~-Gia~lp~~~~~~~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~ 293 (299)
++..|. .+++.....+...+....+.+..........+.-.++...++.++.|++||.+.
T Consensus 158 ~v~~g~~d~~i~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~A~~Fi~fl~S~ 218 (237)
T 2hxw_A 158 LFAQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVIAKEGASKETQDFIAYLSSK 218 (237)
T ss_dssp CTTTTTCSEEEEEHHHHHHSTTSSEEEECCTTTCCEEEEEEEECTTCCHHHHHHHHHTTSH
T ss_pred HHHHCCCEEEEEEHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCH
T ss_conf 9970777099874454532666028996699852587799995899949999999997899