HHsearch results for GI: 254780282 and protein with PDBid: 3cvg_A
>3cvg_A Putative metal binding protein; PSI-II, NYSGXRC, periplasmic, structural genomics, protein structure initiative; 1.97A {Coccidioides immitis RS}
Probab=96.45 E-value=0.0048 Score=35.76 Aligned_cols=198 Identities=10% Similarity=0.036 Sum_probs=85.8
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHH-----CCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCC-------CC
Q ss_conf 233321110000000001356675420-----001222222---222222222222223456543211112-------23
Q gi|254780282|r 94 KLRIATTIDLGQNLLQGNLKEFLLLYP-----DIQIQLILD---NKDIDISMDYADCAIRLRKPIQSSSLI-------QR 158 (299)
Q Consensus 94 ~i~I~~~~~~~~~~l~~~l~~f~~~~P-----~i~i~i~~~---~~~~~l~~~~~Di~i~~~~~~~~~~l~-------~~ 158 (299)
+|+|+...+....++-.+..+|.+.|| +|+|++... .....+..|.+|+++.. .+....... ..
T Consensus 21 ~l~i~~gs~~~~~l~~~la~aF~k~~~~~~~tgi~V~~~~~GSg~~i~~l~~G~~Di~~ss-~~~~~~~~~~~~~~~~~~ 99 (294)
T 3cvg_A 21 QLRIGNGGAGQSGLVKELADAFIKSKVDSGSAPFKVAWYKSDTTVTINYLKDGIVDVGITY-SPVAERISIKHGISESPS 99 (294)
T ss_dssp EEEEEESHHHHHTHHHHHHHHHHHHHHSCC---CEEEEEECCHHHHHHHHHTTSCSEEEES-CHHHHHHHHHTTSBCSSC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEC-CCHHHHHHHHCCCCCCCE
T ss_conf 9999347732688999999999975532368983899996882999999865898468631-702368999738786523
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCCCC------------CCCCCCCCC--CCCCCCCCCHHHHHHHHCC-CCCCCCCCE
Q ss_conf 455-543321123443211122222211------------000112356--6433211000235665202-234321211
Q gi|254780282|r 159 KLV-TIHMHAYAAPHYLKNCREPLSIQE------------LDKHNLITF--GDLIPKCMEDFNWLATVDR-PIGEPRISC 222 (299)
Q Consensus 159 ~l~-~~~~~~v~~~~~~~~~~~~~~~~d------------L~~~~~i~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 222 (299)
.++ +...+++..+..+..........+ ..+.+...+ ................... .........
T Consensus 100 ~~~~~~~~viv~~~~~~~~~~~~~~~~~~~~~~~~w~~~g~~~~~i~~~~r~~~sgt~~~~~~~~~~~~~~~~~~~~~~~ 179 (294)
T 3cvg_A 100 YYAFRDHFMLIGPPSNPAKLSGDSDIADMFSKMHDAAEAGNTKPPVRFLSRYDKSATNIKEAELWLSIGQVPWATAYSTW 179 (294)
T ss_dssp EEEEEEEEEEEECTTCTTCCCTTSCHHHHHHHHHHHHHHCCSSSCCCEEECCSSSHHHHHHHHHHHHTTCCTTSSSCCTT
T ss_pred EECCCCCEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 63256729998898865432332456677655323343147655613553566663468899999861778643334422
Q ss_pred E--EECCCCHHHHHHHHHCCEEEEEHHHHC------CCCCEEE---ECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 4--532420013567873842331177760------1998466---1776667660089993487788889999999999
Q gi|254780282|r 223 L--QVNSYLSIMQYCVLGSGIALLPDYIVK------DNPNLVR---IMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIF 291 (299)
Q Consensus 223 ~--~~~s~~~~~~~v~~g~Gia~lp~~~~~------~~~~lv~---i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~ 291 (299)
. ...........+..+.|.+........ ..+-... +.+...+..++++++..++...++.+++|+|||+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~v~i~k~~kn~~~Ak~Fidfll 259 (294)
T 3cvg_A 180 YHQYITFPIQALTAAILLREYTITDYGTYLSIPRGLRDQMVIYKKGTNDADDPLLNPAHLLVGARAKNAEMAKEFAKWLV 259 (294)
T ss_dssp EEECCSCHHHHHHHHHHTTCEEEEEHHHHTTSCHHHHTTCEEEEECCSCTTCTTEEEEEEEEBSSCSSHHHHHHHHHHHH
T ss_pred HHCCCCCHHHHHHCCCCCCEEEEEEEEEHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHC
T ss_conf 11045411344320344404897421100133213566501321255678864021468999689889499999999984
Q ss_pred H
Q ss_conf 9
Q gi|254780282|r 292 L 292 (299)
Q Consensus 292 ~ 292 (299)
+
T Consensus 260 S 260 (294)
T 3cvg_A 260 S 260 (294)
T ss_dssp S
T ss_pred C
T ss_conf 9