HHsearch results for GI: 254780282 and protein with PDBid: 3eco_A
>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus}
Probab=97.41 E-value=0.00016 Score=44.27 Aligned_cols=78 Identities=18% Similarity=0.264 Sum_probs=60.7
Q ss_pred CCCHHHHHHHHHHHHHC----CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECC-----CCEEEEECCCCCCCCCCC
Q ss_conf 88889999999999827----689999882899789999999999995882179769-----946850013433222222
Q gi|254780282|r 2 SFDWDKLRVFYVVARSG----SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHA-----RGLTLTEQGSKLHRVTSE 72 (299)
Q Consensus 2 ~md~~~L~~f~~v~~~g----s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~-----~~~~lT~~G~~l~~~a~~ 72 (299)
+++..+..++..+++++ +.+.-|+.+++++|+||+.|++||+. |.--..++. +.+.||+.|+.+++.+..
T Consensus 28 glt~~q~~vL~~l~~~~~~~~t~~ela~~l~~~~~tvs~~v~~L~~~-glv~r~~~~~D~R~~~l~LT~~G~~~~~~~~~ 106 (139)
T 3eco_A 28 DITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERK-KLIYRYVDAQDTRRKNIGLTTSGIKLVEAFTS 106 (139)
T ss_dssp TCCHHHHHHHHHHHHSTTTCEEHHHHHHHHTCCHHHHHHHHHHHHHT-TSEEEEECCC--CCEEEEECHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC-CCEEECCCCCCCCEEEEEECHHHHHHHHHHHH
T ss_conf 98999999999998359999699999999896887899999999978-89785167899884675789889999999999
Q ss_pred CCCCCCHH
Q ss_conf 22221012
Q gi|254780282|r 73 VYHKLETT 80 (299)
Q Consensus 73 ~l~~~~~~ 80 (299)
......+-
T Consensus 107 ~~~~~~~~ 114 (139)
T 3eco_A 107 IFDEMEQT 114 (139)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999