HHsearch results for GI: 254780282 and protein with PDBid: 3fzv_A
>3fzv_A Probable transcriptional regulator; LYSR, structural genomics, PSI-2, protein structure initiative; 2.71A {Pseudomonas aeruginosa PA01}
Probab=100.00 E-value=0 Score=343.31 Aligned_cols=290 Identities=18% Similarity=0.211 Sum_probs=242.3
Q ss_pred CC-CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEC-CCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 98-888999999999982768999988289978999999999999588217976-9946850013433222222222210
Q gi|254780282|r 1 MS-FDWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRH-ARGLTLTEQGSKLHRVTSEVYHKLE 78 (299)
Q Consensus 1 m~-md~~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~-~~~~~lT~~G~~l~~~a~~~l~~~~ 78 (299)
|. |||++|++|++++++|||++||+.|++||||||++|++||++||++||+|+ ++|+.||++|+.|+++++.+++.++
T Consensus 1 m~~~~l~~L~~f~~~~~~~s~s~AA~~L~isq~avS~~i~~LE~~lg~~Lf~R~~~~~~~lT~~G~~l~~~a~~il~~~~ 80 (306)
T 3fzv_A 1 MASYTLRQLKYFVTTVECGSVAEASRKLYIAQPSISTAVKGLEESFGVQLFIRHHAQGVSLTPAGARFYRKAQELLRMAH 80 (306)
T ss_dssp ---CCHHHHHHHHHHHHSSSHHHHHHHHTCCC-CHHHHHHHHHHHC-CCCC---------CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99899999999999998299999999988888999999999999839978997899864669889864435678988889
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1221001223222222333211100000000013566754200012222222---2222222222222345654321111
Q gi|254780282|r 79 TTQIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDN---KDIDISMDYADCAIRLRKPIQSSSL 155 (299)
Q Consensus 79 ~~~~~~~~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~---~~~~l~~~~~Di~i~~~~~~~~~~l 155 (299)
++.+.+........|+++||++++++..++++.+.+|.+.||+++|++...+ ...+|..+++|++|.... ...+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~l~~~~~~~P~i~l~~~~~~~~~~~~~L~~~~~Di~i~~~~-~~~~~~ 159 (306)
T 3fzv_A 81 EFEQNALADNDVIAGQIDIGCFETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEH-DLDSTI 159 (306)
T ss_dssp HHHHC-CCCCCCCCEEEEEEEEGGGHHHHHHHHHHHHHHHCTTEEEEEEEECHHHHHHHHHHTSCSEEEECSS-SCCTTE
T ss_pred HHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEEEEECC-CCCCCC
T ss_conf 9999998523577752688850478999989999999853897499999787799999998599736888357-899872
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHH
Q ss_conf 223455-5433211234432111222222110001123566433211000235665202234321211453242001356
Q gi|254780282|r 156 IQRKLV-TIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQY 234 (299)
Q Consensus 156 ~~~~l~-~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 234 (299)
...+++ .+.++++++++|+......++++||.++|++.+..... ......++ ...+......+++++..++.++
T Consensus 160 ~~~~l~~~~~~~v~~~~~~~l~~~~~~~~~dl~~~~~i~~~~~~~-~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~ 234 (306)
T 3fzv_A 160 ETEPLMPPQRPHALLPEGHRFAGQAQVSLRDLCLEPMILLDVQPS-RTYFVSLF----EELGLTPNIAFSSPSIEMVRGM 234 (306)
T ss_dssp EEEESSCCBCCEEEEETTCTTTTSSEECHHHHTTSCEEEECCTTH-HHHHHHHH----HHTTCCCCEEEEESCHHHHHHH
T ss_pred EEEEECCCCEEEEEECCCHHHHCCCCCCHHHHHCCCEEEECCCCC-CCHHHHHH----HHCCCCCCCCCCCCCHHHHHHH
T ss_conf 589921462689996264265337889999981799898459876-51045567----6538775425467888999999
Q ss_pred HHHHCCEEEEEHHHHCC---CC-CEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 78738423311777601---99-8466177666766008999348778888999999999999850
Q gi|254780282|r 235 CVLGSGIALLPDYIVKD---NP-NLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARD 296 (299)
Q Consensus 235 v~~g~Gia~lp~~~~~~---~~-~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r~ 296 (299)
|..|.|++++|...+.+ ++ .++.+....+...+++|++|++++..+|++++|+||+.+++++
T Consensus 235 v~~g~gi~~lp~~~~~~~~~~~~~l~~~~~~~~~~~~~~~li~~~~~~~~~~~~~fi~~lk~~l~~ 300 (306)
T 3fzv_A 235 VGQGFGFSLLVTRPHSECTYDGKKVVMVDLAEPVSTSGLAAAWLKRAQLTKPARLFVDYCREQLGK 300 (306)
T ss_dssp HHTTSCBEEECCCCSCSBCTTSCBEEEEEESSCCCBCCCEEEEETTSCCCHHHHHHHHHHHHHHHC
T ss_pred HHCCCEEEEEEHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 980994999425878898756997799867788764279999989898999999999999999778