HHsearch results for GI: 254780282 and protein with PDBid: 3hv1_A

>3hv1_A Polar amino acid ABC uptake transporter substrate binding protein; protein structure initiative II(PSI II), nysgxrc; 1.90A {Streptococcus thermophilus lmg 18311}
Probab=93.29  E-value=0.34  Score=24.99  Aligned_cols=184  Identities=10%  Similarity=-0.026  Sum_probs=87.3

Q ss_pred             CCCCCCCCCCCCCCC-----------CCCCHHHHHHHHHHCCCCCCCCCC---CCCCCCCCCCCCCCCCCC--CCCCCCC
Q ss_conf             222333211100000-----------000013566754200012222222---222222222222234565--4321111
Q gi|254780282|r   92 SGKLRIATTIDLGQN-----------LLQGNLKEFLLLYPDIQIQLILDN---KDIDISMDYADCAIRLRK--PIQSSSL  155 (299)
Q Consensus        92 ~g~i~I~~~~~~~~~-----------~l~~~l~~f~~~~P~i~i~i~~~~---~~~~l~~~~~Di~i~~~~--~~~~~~l  155 (299)
                      ++.|+||....+.+.           +..+++..+.++- ++++++...+   ....+..|++|+++....  +.....+
T Consensus        20 ~~~l~vg~~~~~pP~~~~~~~g~~~G~~vdl~~~i~~~l-g~~v~~~~~~~~~~~~~l~~g~~Di~~~~~~~~~~r~~~~   98 (268)
T 3hv1_A           20 EKKIKIGFDATFVPMGYEEKDGSYIGFDIDLANAVFKLY-GIDVEWQAIDWDMKETELKNGTIDLIWNGYSVTDERKQSA   98 (268)
T ss_dssp             HTEEEEEECTEETTTEEECTTSCEECHHHHHHHHHHHTT-TCEEEEEECCGGGHHHHHHHTSCSEECSSCBCCHHHHTTC
T ss_pred             CCEEEEEECCCCCCCEEECCCCCEEEEHHHHHHHHHHHH-CCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCE
T ss_conf             997999987898895589999988872999999999996-9965751588899999998699760023266785444115


Q ss_pred             -CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHH
Q ss_conf             -2234555433211234432111222222110001123566433211000235665202234321211453242001356
Q gi|254780282|r  156 -IQRKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQY  234 (299)
Q Consensus       156 -~~~~l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~  234 (299)
                       ...+++....++++.++.     ...+++||.+....... +..... ........ .....+.....++++...++.+
T Consensus        99 ~~s~py~~~~~~~v~~~~~-----~~~~~~dl~~~~i~v~~-gs~~~~-~~~~~~~~-~~~~~~~~~i~~~~~~~~~l~~  170 (268)
T 3hv1_A           99 DFTEPYMVNEQVLVTKKSS-----GIDSVAGMAGKTLGAQA-GSSGYD-AFNASPKI-LKDVVANQKVVQYSTFTQALID  170 (268)
T ss_dssp             EECCCCEEECEEEEEEGGG-----CCCSSGGGTTCCEEEET-TCHHHH-HHHHCTTT-TTTTSGGGCEEEESSHHHHHHH
T ss_pred             EECCCCCCCCEEEEEECCC-----CCCCHHHHCCCCEEEEC-CCHHHH-HHHHHHHH-HHHCCCCCEEEECCCHHHHHHH
T ss_conf             6321213564368986899-----99997895798238866-850999-99986655-5431667324403999999999


Q ss_pred             HHHHCC-EEEEEHHH----HCCCC--CEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHH
Q ss_conf             787384-23311777----60199--84661776667660089993487788889999999
Q gi|254780282|r  235 CVLGSG-IALLPDYI----VKDNP--NLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRN  288 (299)
Q Consensus       235 v~~g~G-ia~lp~~~----~~~~~--~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d  288 (299)
                      +.+|.. ..+.....    +++.+  ....+.+. ......+++..+++   ++.....++
T Consensus       171 L~~grvD~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~k~---~~~L~~~in  227 (268)
T 3hv1_A          171 LNSGRIDGLLIDRVYANYYLEKSGVLDQYNVMPA-GYEGESFAVGARKV---DKTLIKKIN  227 (268)
T ss_dssp             HHHTSCSEEEEEHHHHHHHHHHTTCGGGEEEEEC-SSCCEEECCEECTT---CHHHHHHHH
T ss_pred             HHCCCEEEEEECHHHHHHHHHHCCCCCCEEECCC-CCCCCEEEEEEECC---CHHHHHHHH
T ss_conf             9769757999438999999985898883033377-77774389998189---999999999