HHsearch results for GI: 254780282 and protein with PDBid: 3jth_A

>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=95.18  E-value=0.019  Score=32.30  Aligned_cols=50  Identities=22%  Similarity=0.323  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHH-HCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCC
Q ss_conf             99999999998-2768999988289978999999999999588217976994
Q gi|254780282|r    6 DKLRVFYVVAR-SGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARG   56 (299)
Q Consensus         6 ~~L~~f~~v~~-~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~   56 (299)
                      ..++.+..+.+ ..+++.=|+.+++|||+||+|++.|++ -|.--..|.|+.
T Consensus        24 ~Rl~Il~~L~~~~~~v~ela~~l~~s~~tvS~HL~~L~~-aglV~~~r~G~~   74 (98)
T 3jth_A           24 RRLQILCMLHNQELSVGELCAKLQLSQSALSQHLAWLRR-DGLVTTRKEAQT   74 (98)
T ss_dssp             HHHHHHHHTTTSCEEHHHHHHHHTCCHHHHHHHHHHHHH-TTSEEEECCTTC
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHH-CCCEEEEEECCE
T ss_conf             999999999729937999999988595678899999998-894269987689