HHsearch results for GI: 254780282 and protein with PDBid: 3jw4_A
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum}
Probab=96.04 E-value=0.0019 Score=38.13 Aligned_cols=79 Identities=14% Similarity=0.173 Sum_probs=58.5
Q ss_pred CCCHHHHHHHHHHHHHC----CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEE----EEECCCCEEEEECCCCCCCCCCCC
Q ss_conf 88889999999999827----6899998828997899999999999958821----797699468500134332222222
Q gi|254780282|r 2 SFDWDKLRVFYVVARSG----SFTHAAEQLHLSQSSISRQISGLETEVGIKL----FYRHARGLTLTEQGSKLHRVTSEV 73 (299)
Q Consensus 2 ~md~~~L~~f~~v~~~g----s~s~AA~~L~itq~avS~~i~~LE~~lg~~L----f~R~~~~~~lT~~G~~l~~~a~~~ 73 (299)
+++..++.++..+++.+ +.+.-|+.++++.|++|+.|++||+.==+.- -+|....+.||+.|+.+++.+...
T Consensus 38 glt~~q~~vL~~L~~~~~~~it~~eLa~~l~~~~~~~sr~l~~L~~~glI~r~~~~~D~R~~~l~LT~~G~~~~~~~~~~ 117 (148)
T 3jw4_A 38 GLNSQQGRMIGYIYENQESGIIQKDLAQFFGRRGASITSMLQGLEKKGYIERRIPENNARQKNIYVLPKGAALVEEFNNI 117 (148)
T ss_dssp TCCHHHHHHHHHHHHHTTTCCCHHHHHHC------CHHHHHHHHHHTTSBCCC--------CCCCBCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECHHHHHHHHHHHHH
T ss_conf 98999999999999379999399999999897785899999999988885105778888834768898899999999999
Q ss_pred CCCCCHH
Q ss_conf 2221012
Q gi|254780282|r 74 YHKLETT 80 (299)
Q Consensus 74 l~~~~~~ 80 (299)
.....+.
T Consensus 118 ~~~~~~~ 124 (148)
T 3jw4_A 118 FLEVEES 124 (148)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999999