HHsearch results for GI: 254780282 and protein with PDBid: 3mpk_A

>3mpk_A Virulence sensor protein BVGS; venus flytrap, sensor domain, signaling protein; 2.04A {Bordetella pertussis} PDB: 3mpl_A
Probab=93.03  E-value=0.34  Score=24.99  Aligned_cols=180  Identities=16%  Similarity=0.134  Sum_probs=90.1

Q ss_pred             CCCCCCCCCCCCCC-----------CCCCHHHHHHHHHHCCCCCCC-CCC---CCCCCCCCCCCCCCCCCC-CCCCCCC-
Q ss_conf             22333211100000-----------000013566754200012222-222---222222222222234565-4321111-
Q gi|254780282|r   93 GKLRIATTIDLGQN-----------LLQGNLKEFLLLYPDIQIQLI-LDN---KDIDISMDYADCAIRLRK-PIQSSSL-  155 (299)
Q Consensus        93 g~i~I~~~~~~~~~-----------~l~~~l~~f~~~~P~i~i~i~-~~~---~~~~l~~~~~Di~i~~~~-~~~~~~l-  155 (299)
                      +.|+||+.+...+.           +..+++..+.+.. ++++++. ..+   ...++..|++|++..+.. +.....+ 
T Consensus        32 ~~l~v~~~~~~~P~~~~~~~g~~~G~~~dll~~i~~~l-g~~~~~~~~~~~~~~~~~l~~g~~Di~~~~~~t~~r~~~~~  110 (267)
T 3mpk_A           32 PVVKVAVLNLFAPFTLFRTDEQFGGISAAVLQLLQLRT-GLDFEIIGVDTVEELIAKLRSGEADMAGALFVNSARESFLS  110 (267)
T ss_dssp             SEEEEEEETEETTTEECCTTCCCBSHHHHHHHHHHHHH-CCEEEEEEESSHHHHHHHHHHTSCSEEEEEECCGGGTTTEE
T ss_pred             CEEEEEECCCCCCCEEECCCCCEEEHHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHCCC
T ss_conf             93999984898995699899988778999999999984-99579998289999999863696659964789988984077


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHH
Q ss_conf             22345554332112344321112222221100011235664332110002356652022343212114532420013567
Q gi|254780282|r  156 IQRKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYC  235 (299)
Q Consensus       156 ~~~~l~~~~~~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v  235 (299)
                      ...+++....+++..++.    ....++++|.+..+.... +..    ....+...     .+......+++...++.++
T Consensus       111 ~s~p~~~~~~~~v~~~~~----~~~~~~~~l~g~~i~~~~-g~~----~~~~l~~~-----~~~~~i~~~~~~~~~l~~L  176 (267)
T 3mpk_A          111 FSRPYVRNGMVIVTRQDP----DAPVDADHLDGRTVALVR-NSA----AIPLLQRR-----YPQAKVVTADNPSEAMLMV  176 (267)
T ss_dssp             ECSCSEEECEEEEEESST----TSCSSGGGCTTCEEEEET-TCT----HHHHHHHH-----CTTSEEEEESSHHHHHHHH
T ss_pred             CCCCEECCCEEEEEECCC----CCCCCHHHHCCCCEEEEC-CCH----HHHHHHHH-----CCCCEEEEECCHHHHHHHH
T ss_conf             676213044045420144----345798896587305541-540----56999972-----8874179980689877898


Q ss_pred             HHHCCEEEE-EHHH----HCC--CCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf             873842331-1777----601--9984661776667660089993487788889999999999
Q gi|254780282|r  236 VLGSGIALL-PDYI----VKD--NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIF  291 (299)
Q Consensus       236 ~~g~Gia~l-p~~~----~~~--~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~  291 (299)
                      ..|..=+++ +...    +++  .+.+ .+.......+..+++..+++   ++.+...++-.+
T Consensus       177 ~~GrvDa~i~~~~~~~~~l~~~~~~~~-~v~~~~~~~~~~~~~~~~k~---~~~L~~~in~~L  235 (267)
T 3mpk_A          177 ANGQADAVVQTQISASYYVNRYFAGKL-RIASALDLPPAEIALATTRG---QTELMSILNKAL  235 (267)
T ss_dssp             HHTSCSEEEEEHHHHHHHHHHHCTTTE-EEEEECSSCCEEEEEEEETT---CHHHHHHHHHHH
T ss_pred             HCCCCCEEECCHHHHHHHHHHCCCCCE-EEEECCCCCCEEEEEEEECC---CHHHHHHHHHHH
T ss_conf             879867684279999999983899976-99504677752699999489---999999999999