HHsearch results for GI: 254780282 and protein with PDBid: 3mz1_A
>3mz1_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative, MI center for STR uctural genomics, MCSG; 1.88A {Sinorhizobium meliloti}
Probab=100.00 E-value=0 Score=352.37 Aligned_cols=290 Identities=23% Similarity=0.381 Sum_probs=246.4
Q ss_pred HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 99999999998276899998828997899999999999958821797699468500134332222222222101221001
Q gi|254780282|r 6 DKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLTEQGSKLHRVTSEVYHKLETTQIELQ 85 (299)
Q Consensus 6 ~~L~~f~~v~~~gs~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~~~~~~lT~~G~~l~~~a~~~l~~~~~~~~~~~ 85 (299)
..|++|++|+++|||++||++||+||||||++|++||++||++||+|+++|+.||++|+.|+++++.++...+++.....
T Consensus 1 ~~L~~f~av~~~gS~s~AA~~L~~sq~avS~~i~~LE~~lg~~Lf~R~~~~~~lT~~G~~l~~~a~~~~~~~~~~~~~~~ 80 (300)
T 3mz1_A 1 QGMRAFLRVVETGNFTRASASLNMPKATVTNLIQGLEAHLRTKLLNRTTRRVLVTPDGALYYERAARLLSDLDELDGSLS 80 (300)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 91189999998199999999988698999999999999859978998799714898798667888763132322222222
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22322222233321110000000001356675420001222222222222222222223456543211112234555433
Q gi|254780282|r 86 ESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNKDIDISMDYADCAIRLRKPIQSSSLIQRKLVTIHM 165 (299)
Q Consensus 86 ~~~~~~~g~i~I~~~~~~~~~~l~~~l~~f~~~~P~i~i~i~~~~~~~~l~~~~~Di~i~~~~~~~~~~l~~~~l~~~~~ 165 (299)
.......|.++||++++++..++++.+.+|.++||+++|++..++...++..+++|++|....+ .++++...+++++++
T Consensus 81 ~~~~~~~~~~~i~~~~~~~~~~l~~~l~~~~~~~p~i~i~i~~~~~~~~l~~~~~Di~i~~~~~-~~~~l~~~~l~~~~~ 159 (300)
T 3mz1_A 81 TAQSLPKGRLRVETASAFANLVIIPALPEFHKKYPDIQIDLGVSDRTIDYLAENVDCAIRAGTL-TDQSLIARRITEMKF 159 (300)
T ss_dssp ----CCCEEEEEEECHHHHHHTHHHHHHHHHHHCTTEEEEEEECCCC--CCCTTCCEEEEESSC-SCTTSEEEEEEEECE
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHCCCCEEEEEECCC-CCCCCEEEEECCCCE
T ss_conf 3345776415511347899999999999999988984999997863678876992499990788-875533544045526
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCEEEEE
Q ss_conf 21123443211122222211000112356643321100023566520223432121145324200135678738423311
Q gi|254780282|r 166 HAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVLGSGIALLP 245 (299)
Q Consensus 166 ~~v~~~~~~~~~~~~~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~g~Gia~lp 245 (299)
+++++++|+..++.....+.+...+.+.......................+......+++++..+++.++..|.|++++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~gi~~lp 239 (300)
T 3mz1_A 160 VACASRDFLERHPVPQHPSDLEKNCYVVGYFLPKTGQQMPFHFRRGNEEIEVSGRYTMAANESTTYLAAARAGLGVIQAP 239 (300)
T ss_dssp EEEEEHHHHHHSCCCSSGGGGGTTSCEEEEBCCC--CBCCEEEEETTEEEEECCCEEEEESSHHHHHHHHHTTCCBEEEE
T ss_pred EEEECHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCEEEECC
T ss_conf 99965799974478776678641001101024556522567766543202556531476241378899851798599876
Q ss_pred HHHHCC---CCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 777601---998466177666766008999348778888999999999999850
Q gi|254780282|r 246 DYIVKD---NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFIFLKARD 296 (299)
Q Consensus 246 ~~~~~~---~~~lv~i~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~~~~r~ 296 (299)
.+++++ +++++.++++.....+++|++|++++..+|++++|+|||.+.+.+
T Consensus 240 ~~~~~~~~~~g~lv~~~~~~~~~~~~~~lv~~~~~~~~~~~~~f~d~l~e~~~~ 293 (300)
T 3mz1_A 240 LFMVREDLRNGTMVPVLPDWQVEPMPIYLVYPPNRHLSSRLRVFADWVVKVMAQ 293 (300)
T ss_dssp HHHHHHHHHHTSEEECCTTCBCCCEEEEEEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999999987898799688777886369999969987899999999999999853