HHsearch results for GI: 254780282 and protein with PDBid: 3nqo_A

>3nqo_A MARR-family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 2.20A {Clostridium difficile}
Probab=97.39  E-value=0.00012  Score=44.93  Aligned_cols=74  Identities=15%  Similarity=0.159  Sum_probs=58.2

Q ss_pred             CCCHHHHHHHHHHHHHC----CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEC-------CCCEEEEECCCCCCCCC
Q ss_conf             88889999999999827----68999988289978999999999999588217976-------99468500134332222
Q gi|254780282|r    2 SFDWDKLRVFYVVARSG----SFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRH-------ARGLTLTEQGSKLHRVT   70 (299)
Q Consensus         2 ~md~~~L~~f~~v~~~g----s~s~AA~~L~itq~avS~~i~~LE~~lg~~Lf~R~-------~~~~~lT~~G~~l~~~a   70 (299)
                      +++..+..++..+...+    +++.=|+.+++++|+||+.|++||+.   -|+.|.       ...+.||+.|+.+++.+
T Consensus        38 ~Lt~~q~~vL~~l~~~~~~~~t~~eLa~~l~i~~stvs~~v~~Le~~---glI~r~~~~~D~R~~~l~LT~kG~~~~~~~  114 (189)
T 3nqo_A           38 ILTSRQYMTILSILHLPEEETTLNNIARKMGTSKQNINRLVANLEKN---GYVDVIPSPHDKRAINVKVTDLGKKVMVTC  114 (189)
T ss_dssp             SSCHHHHHHHHHHHHSCGGGCCHHHHHHHHTSCHHHHHHHHHHHHHT---TSEEEEECSSCSSCEEEEECHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHC---CCCEEEECCCCCCEEEEEECHHHHHHHHHH
T ss_conf             99999999999998478999099999999896886999999999987---986374326765401346788899999999


Q ss_pred             CCCCCCCC
Q ss_conf             22222210
Q gi|254780282|r   71 SEVYHKLE   78 (299)
Q Consensus        71 ~~~l~~~~   78 (299)
                      ........
T Consensus       115 ~~~~~~~~  122 (189)
T 3nqo_A          115 SRTGINFM  122 (189)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             99999999