RPSBLAST alignment of GI: 254780282 and protein with PDBid: 2hxr
>2hxr_A HTH-type transcriptional regulator CYNR; CYNR transcriptional regulator LYSR structural genomics, PSI-2, protein structure initiative; 2.05A {Escherichia coli K12} PDB: 3hfu_A Length = 238
Score = 57.1 bits (136), Expect = 4e-09
Identities = 39/244 (15%), Positives = 73/244 (29%), Gaps = 22/244 (9%)
Query: 49 LFYRHARGLTLTEQGSKLHRVTSEVYHKLETTQIELQESSVKPSGKLRIATTIDLGQNLL 108
++ ++A +L + + + + G LRIA T +
Sbjct: 2 VWRQYAS----------------RALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFI 45
Query: 109 QGNLKEFLLLY--PDIQIQLILDNKDIDISMDYADCAIRLRKPIQSSSLIQRKLVTIHMH 166
+ +F Y +Q+Q + K D+ P+ S L L+T +
Sbjct: 46 GPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLA 105
Query: 167 AYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVN 226
A H+ E +++ L L+ + G ++ N
Sbjct: 106 LVVAQHHPLAVHEQVALSRLHDEKLVLL----SAEFATREQIDHYCEKAGLHPQVVIEAN 161
Query: 227 SYLSIMQYCVLGSGIALLPDYIVKDNPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAF 286
S ++++ S LLP I + L I T + T KAF
Sbjct: 162 SISAVLELIRRTSLSTLLPAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAF 221
Query: 287 RNFI 290
+
Sbjct: 222 LHMA 225