RPSBLAST alignment of GI: 254780282 and protein with PDBid: 3fxq
>3fxq_A LYSR type regulator of TSAMBCD; transcriptional regulator, LTTR, TSAR, WHTH, DNA- binding, plasmid, transcription; 1.85A {Comamonas testosteroni} PDB: 3fxr_A* 3fxu_A* 3fzj_A Length = 305
Score = 147 bits (372), Expect = 2e-36
Identities = 53/294 (18%), Positives = 92/294 (31%), Gaps = 12/294 (4%)
Query: 4 DWDKLRVFYVVARSGSFTHAAEQLHLSQSSISRQISGLETEVGIKLFYRHARGLTLTEQG 63
L+ + GS AA+ LHLSQ ++S I LE E+ L R RG++LT G
Sbjct: 3 KLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFG 62
Query: 64 SKLHRVTSEVYHKLETTQIELQESSVKPSGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQ 123
+ + + Q E+ + + G + A + + L L F +PD+
Sbjct: 63 QAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVT 122
Query: 124 IQLILDNKDI---DISMDYADCAI-RLRKPIQSSSLIQRKLVTIHMHAYAAPHYLKNCRE 179
+ + + D A+ K + L + L + +
Sbjct: 123 VNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHP--MAN 180
Query: 180 PLSIQELDKHNLITFGDLIPKCMEDFNWLATVDRPIGEPRISCLQVNSYLSIMQYCVLGS 239
+ EL + N A P L S+L++
Sbjct: 181 ATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLP---EPKLGLVCESFLALPGVVAHSD 237
Query: 240 GIALLPDYIVKD---NPNLVRIMEDVITPSFTVYFCYPEALKNTGKLKAFRNFI 290
+ +P + + L I P+ T+Y L T +I
Sbjct: 238 LLTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLIRWI 291